| Protein: | ERB1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 807 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERB1.
| Description | E-value | Query Range |
Subject Range |
|
|
661.0 | [0..108] | [806..28] |
|
|
653.0 | [0..11] | [806..13] |
|
Region A: Residues: [1-308] |
1 11 21 31 41 51
| | | | | |
1 MMAKNNKTTE AKMSKKRAAS EESDVEEDED KLLSVDGLID AEASESDEDD DEYESAVEEK 60
61 ESSSDKEAQD DSDDDSDAEL NKLLAEEEGD GEEDYDSSEF SDDTTSLTDR LSGVKLQTIV 120
121 DPNIYSKYAD GSDRIIKPEI NPVYDSDDSD AETQNTIGNI PLSAYDEMPH IGYDINGKRI 180
181 MRPAKGSALD QLLDSIELPE GWTGLLDKNS GSSLNLTKEE LELISKIQRN EQTDDSINPY 240
241 EPLIDWFTRH EEVMPLTAVP EPKRRFVPSK NEAKRVMKIV RAIREGRIIP PKKLKEMKEK 300
301 EKIENYQY
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [309-368] |
1 11 21 31 41 51
| | | | | |
1 DLWGDSTETN DHVMHLRAPK LPPPTNEESY NPPEEYLLSP EEKEAWENTE YSERERNFIP 60
61
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [369-751] |
1 11 21 31 41 51
| | | | | |
1 QKYSALRKVP GYGESIRERF ERSLDLYLAP RVRKNKLNID PNSLIPELPS PKDLRPFPIR 60
61 CSTIYAGHKG KVRTLSIDPS GLWLATGSDD GTVRVWEILT GREVYRTTLI DDEENPDYHI 120
121 ECIEWNPDAN NGILAVAVGE NIHLIVPPIF GYDIENNGKT KIEDGFGYDT FGTVKKSNLE 180
181 VNENGDGDED GENESAKNAV KKQVAQWNKP SQKQLEKDIC ITISCKKTVK KLSWHRKGDY 240
241 FVTVQPDSGN TSVLIHQVSK HLTQSPFKKS KGIIMDAKFH PFKPQLFVCS QRYVRIYDLS 300
301 QQILVKKLLP GARWLSKIDI HPRGDNLIAS SFDKRVLWHD LDLASTPYKT LRYHEKAVRS 360
361 VNFHKKLPLF SSAADDGTIH VFH
|
| Detection Method: | |
| Confidence: | 72.69897 |
| Match: | 1gg2B |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [752-807] |
1 11 21 31 41 51
| | | | | |
1 ATVYDDMMKN PMIVPLKKLT GHKVINSLGV LDAIWHPREA WLFSAGADNT ARLWTT
|
| Detection Method: | |
| Confidence: | 59.69897 |
| Match: | 1erjA |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
