| Protein: | CDC5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 705 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..705] | [1..705] |
|
|
0.0 | [56..678] | [1..598] |
|
|
0.0 | [35..678] | [9..628] |
|
|
0.0 | [47..678] | [1..591] |
|
|
0.0 | [1..518] | [1..514] |
|
|
0.0 | [1..541] | [1..546] |
|
|
0.0 | [60..542] | [5..486] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MSLGPLKAIN DKQLNTRSKL VHTPIKGNTA DLVGKENHFK QTKRLDPNND HHHQPAQKKK 60
61 REKLSALCKT PP
|
|
Region B: Residues: [125-144] |
1 11 21 31 41 51
| | | | | |
1 KLLSEIQIHK SMSHPNIVQF
|
|
Region C: Residues: [160-368] |
1 11 21 31 41 51
| | | | | |
1 ICPNGSLMEL LKRRKVLTEP EVRFFTTQIC GAIKYMHSRR VIHRDLKLGN IFFDSNYNLK 60
61 IGDFGLAAVL ANESERKYTI CGTPNYIAPE VLMGKHSGHS FEVDIWSLGV MLYALLIGKP 120
121 PFQARDVNTI YERIKCRDFS FPRDKPISDE GKILIRDILS LDPIERPSLT EIMDYVWFRG 180
181 TFPPSIPSTV MSEAPNFEDI PEEQSLVNF
|
| Detection Method: |  |
| Confidence: | 486.0 |
| Match: | 1ctpE_ |
| Description: | cAMP-dependent PK, catalytic subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [73-124] |
1 11 21 31 41 51
| | | | | |
1 SLIKTRGKDY HRGHFLGEGG FARCFQIKDD SGEIFAAKTV AKASIKSEKT RK
|
|
Region B: Residues: [145-159] |
1 11 21 31 41 51
| | | | | |
1 IDCFEDDSNV YILLE
|
|
Region C: Residues: [369-382] |
1 11 21 31 41 51
| | | | | |
1 KDCMEKSLLL ESMS
|
| Detection Method: | |
| Confidence: | 486.0 |
| Match: | 1ctpE_ |
| Description: | cAMP-dependent PK, catalytic subunit |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [383-455] |
1 11 21 31 41 51
| | | | | |
1 SDKIQRQKRD YISSIKSSID KLEEYHQNRP FLPHSLSPGG TKQKYKEVVD IEAQRRLNDL 60
61 AREARIRRAQ QAV
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1ahr__ |
| Description: | Calmodulin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [456-519] |
1 11 21 31 41 51
| | | | | |
1 LRKELIATST NVIKSEISLR ILASECHLTL NGIVEAEAQY KMGGLPKSRL PKIKHPMIVT 60
61 KWVD
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1ahr__ |
| Description: | Calmodulin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [520-602] |
1 11 21 31 41 51
| | | | | |
1 YSNKHGFSYQ LSTEDIGVLF NNGTTVLRLA DAEEFWYISY DDREGWVASH YLLSEKPREL 60
61 SRHLEVVDFF AKYMKANLSR VST
|
| Detection Method: | |
| Confidence: | 8.38 |
| Match: | 1mbyA |
| Description: | Sak kinase Polo domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [603-705] |
1 11 21 31 41 51
| | | | | |
1 FGREEYHKDD VFLRRYTRYK PFVMFELSDG TFQFNFKDHH KMAISDGGKL VTYISPSHES 60
61 TTYPLVEVLK YGEIPGYPES NFREKLTLIK EGLKQKSTIV TVD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
