| Protein: | VAN1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 535 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VAN1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..535] | [1..535] |
|
|
0.0 | [126..533] | [33..440] |
|
|
0.0 | [169..519] | [74..379] |
|
|
0.0 | [166..514] | [50..354] |
|
|
0.0 | [147..514] | [22..337] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MGMFFNLRSN IKKKAMDNGL SLPISRNGSS NNIKDKRSEH NSNSLKGKYR YQPRSTPSKF 60
61 QLTVSITSLI IIAVLSLYLF ISFLSGMGIG VSTQNGRSLL GSSKSSENYK TIDLEDEEYY 120
121 D
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.214 | a.1.1 | Globin-like |
| View | Download | 0.413 | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.413 | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.214 | a.1.1 | Globin-like |
| View | Download | 0.212 | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.212 | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
|
Region A: Residues: [122-535] |
1 11 21 31 41 51
| | | | | |
1 YDFEDIDPEV ISKFDDGVQH YLISQFGSEV LTPKDDEKYQ RELNMLFDST VEEYDLSNFE 60
61 GAPNGLETRD HILLCIPLRN AADVLPLMFK HLMNLTYPHE LIDLAFLVSD CSEGDTTLDA 120
121 LIAYSRHLQN GTLSQIFQEI DAVIDSQTKG TDKLYLKYMD EGYINRVHQA FSPPFHENYD 180
181 KPFRSVQIFQ KDFGQVIGQG FSDRHAVKVQ GIRRKLMGRA RNWLTANALK PYHSWVYWRD 240
241 ADVELCPGSV IQDLMSKNYD VIVPNVWRPL PTFLGTEQPY DLNSWMESQE ALALAKTLDE 300
301 DDVIVEGYAE YPTWRVHLAY IRDAEGDPNE AVDLDGVGGV SILAKAKIFR NGVQFPAFTF 360
361 ENHAETEAFG KMAKKMGYRV GGLPHYTIWH IYEPSDDDLK EIASREREKR RQSE
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | PF03452 |
| Description: | Anp1 |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| UDP-glycosyltransferase activity | 6.01354989568484 | bayes_pls_golite062009 |
| acetylgalactosaminyltransferase activity | 5.66606808201136 | bayes_pls_golite062009 |
| alpha-1,2-mannosyltransferase activity | 5.62955108548526 | bayes_pls_golite062009 |
| polypeptide N-acetylgalactosaminyltransferase activity | 5.60505224219681 | bayes_pls_golite062009 |
| mannosyltransferase activity | 5.1732667004955 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 4.21261757812439 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 4.02812104984198 | bayes_pls_golite062009 |
| transferase activity | 2.3313878748424 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.79751747857925 | bayes_pls_golite062009 |
| catalytic activity | 1.73979371332125 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.47767908405723 | bayes_pls_golite062009 |
| N-acetyllactosamine synthase activity | 0.925872529464618 | bayes_pls_golite062009 |
| lactose synthase activity | 0.925872529464618 | bayes_pls_golite062009 |
| binding | 0.61043334112269 | bayes_pls_golite062009 |
| alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity | 0.386636074342689 | bayes_pls_golite062009 |
| protein binding | 0.18104648403595 | bayes_pls_golite062009 |
