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View Structure Prediction Details

Protein: MFT1
Organism: Saccharomyces cerevisiae
Length: 392 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MFT1.

Description E-value Query
Range		 Subject
Range
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 4.0E-46 [4..392] [70..470]
MFT1_YEAST - THO complex subunit MFT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MFT1 PE=1 SV=1
MFT1 - Subunit of the THO complex, which is a nuclear complex comprised of Hpr1p, Mft1p, Rlr1p, and Thp2p, ...
gi|190408181 - gi|190408181|gb|EDV11446.1| mitochondrial targeting protein [Saccharomyces cerevisiae RM11-1a]
gi|207342546 - gi|207342546|gb|EDZ70282.1| YML062Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 1.0E-44 [1..392] [1..392]
SPCC737.08 - midasin
MDN1_SCHPO - Midasin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mdn1 PE=1 SV=1
 3.0E-43 [40..392] [3921..4228]
CG13185-PB - This gene is referred to in FlyBase by the symbol Dmel\CG13185 (CG13185, FBgn0033661). It is a prote...
 4.0E-43 [29..382] [4376..4781]
MYO7_ARATH - Myosin-7 OS=Arabidopsis thaliana GN=XI-A PE=3 SV=1
 1.0E-37 [40..369] [880..1217]
gi|15212037 - gi|15212037|emb|CAC51118.1| putative bifunctional autolysin [Staphylococcus xylosus]
 8.0E-34 [4..388] [70..467]
NCKX1_RAT - Sodium/potassium/calcium exchanger 1 OS=Rattus norvegicus GN=Slc24a1 PE=2 SV=1
 2.0E-32 [74..368] [651..930]

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Predicted Domain #1
Region A:
Residues: [1-72] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLSQKQIDQ VRTKVHYSEV DTPFNKYLDI LGKVTKLTGS IINGTLSNDD SKIEKLTEQN  60
   61 ISQLKESAHL RF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [73-202] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDLQSSIDTK KVADENWETC QQETLAKLEN LKDKLPDIKS IHSKLLLRIG KLQGLYDSVQ  60
   61 VINREVEGLS EGRTSLVVTR AEWEKELGTD LVKFLIEKNY LKLVDPGLKK DSSEERYRIY 120
  121 DDFSKGPKEL

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.5
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #3
Region A:
Residues: [203-281] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESINASMKSD IENVRQEVSS YKEKWLRDAE IFGKITSIFK EELLKRDGLL NEAEGDNIDE  60
   61 DYESDEDEER KERFKRQRS

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.5
Match: 1l8mA
Description: No description for 1l8mA was found.

Predicted Domain #4
Region A:
Residues: [282-392] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEVNTIENV DEKEESDHEY DDQEDEENEE EDDMEVDVED IKEDNEVDGE SSQQEDNSRQ  60
   61 GNNEETDKET GVIEEPDAVN DAEEADSDHS SRKLGGTTSD FSASSSVEEV K

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.5
Match: 1l8mA
Description: No description for 1l8mA was found.
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle