YRC Public Data Repository - Protein Structure Prediction

Protein:	CGI121
Organism:	Saccharomyces cerevisiae
Length:	189 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CGI121.

Description	E-value	Query Range	Subject Range
gi\|151946126 - gi\|151946126\|gb\|EDN64357.1\| conserved protein [Saccharomyces cerevisiae YJM789] gi\|190408205 - gi\|190408205\|gb\|EDV11470.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi\|207342503 - gi\|207342503\|gb\|EDZ70252.1\| YML036Wp-like protein [Saccharomyces cerevisiae AWRI1631] CGI121 - Protein involved in telomere uncapping and elongation as component of the KEOPS protein complex with...	2.0E-78	[1..189]	[1..189]
TPRKB_MOUSE - EKC/KEOPS complex subunit Tprkb OS=Mus musculus GN=Tprkb PE=1 SV=1	6.0E-50	[6..153]	[7..148]
TPRKB - TP53RK binding protein	4.0E-49	[6..153]	[7..148]
SPCC24B10.12 - CGI121 family protein CG121_SCHPO - EKC/KEOPS complex subunit cgi121 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cgi121 PE...	2.0E-43	[5..152]	[2..148]
CE17274 - status:Confirmed UniProt:O44566 protein_id:AAB94192.1	1.0E-42	[16..153]	[24..155]
gi\|115434464, gi... - gi\|34895710\|ref\|NP_909204.1\| unknown protein [Oryza sativa (japonica cultivar-group)], gi\|222617714\|...	3.0E-37	[14..136]	[12..130]
gi\|2650113, gi\|1... - gi\|2650113\|gb\|AAB90726.1\| predicted coding region AF_0519 [Archaeoglobus fulgidus DSM 4304], gi\|1149... gi\|7483436 - pir\|\|G69314 hypothetical protein AF0519 - Archaeoglobus fulgidus	0.001	[39..119]	[21..100]

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Predicted Domain #1

Region A:
Residues: [1-189]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVSIIPQFP DIKVSLALFE QVKNAKEIRS KMSELSTSFA FIDPRLVCSG EQMYSAIYKT  60
   61 LIEVKYNKMR TRNLNSECVL CLSPTSNISD AFLKFGIKDD SSQLICLKFH TNTDDVDKEQ 120
  121 LRTIMTSIVK GQEIEFNDDN LSRFYDEALI RKVCFNNKFE VKTSTASPET HCTNFTFVFL 180
  181 LFCFYLLDL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits