| Protein: | MRPL4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 319 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPL4.
| Description | E-value | Query Range |
Subject Range |
|
|
581.0 | [0..1] | [319..1] |
|
|
311.0 | [0..1] | [314..1] |
|
|
265.0 | [0..15] | [311..16] |
|
|
265.0 | [0..1] | [306..30] |
|
|
172.0 | [0..52] | [180..47] |
|
|
162.0 | [0..58] | [184..35] |
|
|
159.0 | [0..52] | [171..22] |
|
|
153.0 | [0..68] | [184..27] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MWKRSFHSQG GPLRARTKFT KPKPKQPVLP KDKIRPPTQL THHSNNLRIT EPIPPTTSNL 60
61 RCPDDHPLWQ FFSNKKFIRS ADDLP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.360 | a.77.1 | DEATH domain |
| View | Download | 0.360 | a.77.1 | DEATH domain |
| View | Download | 0.288 | d.15.1 | Ubiquitin-like |
| View | Download | 0.274 | a.204.1 | Description not found. |
| View | Download | 0.256 | a.7.16 | Description not found. |
| View | Download | 0.255 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
|
Region A: Residues: [86-191] |
1 11 21 31 41 51
| | | | | |
1 PSSHIRPWSI PELRHKSFND LHSLWYNCLR EQNVLARENH LLKNIVGSTH DEFSELSNSI 60
61 RTTMWQIRHV LNERELAYSA SREFLQDESE RKKFLDTLAN DYFLNK
|
| Detection Method: | |
| Confidence: | 7.09 |
| Match: | |
| Description: | No description for 1ffkS was found. |
|
Region A: Residues: [192-319] |
1 11 21 31 41 51
| | | | | |
1 DIPDDEVASM LTRFQLAIFG ISETIQDNTV DINFIDGIKF LANLKLQRFK DSNDLISEIS 60
61 QEPITDVGES FILFTSDFEP HAVQEACVAI KDLRKSPDNK VPKLDELPTV RKYLKQLIHA 120
121 SSVEQATA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.714 | c.23.14 | Nucleoside 2-deoxyribosyltransferase |
| View | Download | 0.681 | a.24.3 | Cytochromes |
| View | Download | 0.651 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.651 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.649 | a.118.1 | ARM repeat |
| View | Download | 0.640 | d.58.36 | Sulfite reductase, domains 1 and 3 |
| View | Download | 0.624 | a.24.3 | Cytochromes |
| View | Download | 0.603 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.595 | a.24.3 | Cytochromes |
