| Protein: | ECM30 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1274 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECM30.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1274] | [1..1274] |
|
|
0.0 | [75..394] | [29..367] |
|
|
0.0 | [73..394] | [23..367] |
|
|
1.0E-95 | [75..379] | [29..350] |
|
|
2.0E-84 | [103..392] | [55..349] |
|
|
2.0E-74 | [103..394] | [52..341] |
|
Region A: Residues: [1-406] |
1 11 21 31 41 51
| | | | | |
1 MGNTDSKSSS ILLNHCIALV RPEDADASSP SRTSSPSPSL SVDADPLSLN LSIFKLDSGP 60
61 DVEALFSDKP NVPLDTVFND FYLDFISVDV QDFSINSSFK KILHIISSLN PPNFNNLIVF 120
121 LSLYIILSAN SLPASRTGLH SSRLINAIKT LSILIPIYFD RVKSSTQDHY DVFWATQHEI 180
181 EGLPLQNIPL GERLLLAILK LAFQDNFTTA VTAHPSELWE IGILTNSNKY RSLLNMHHQW 240
241 HLFANRLLLL RLLAALFSSD LYTSGGKQDI NMFLVYWCTQ MPKDKSIQFT SSLLNCTMRF 300
301 ILNNNKDFQS LKANFFSSDA TASNWQTLYF QFVQSCLHVL NLSMSYKAQD NVITIFLTQL 360
361 QREYDLKLIL SSFIKIFKYP IDLAIEQESN IFNFTNNKHI DASRRR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [407-1274] |
1 11 21 31 41 51
| | | | | |
1 AVSTSSHDNS SSSHASLPSS SSAAYHTKPQ TKPQLPEIHP LLIPMTILMT NLIDCNKCFQ 60
61 NYFADKFASR FIIFSIYYLK YYDYSSLSSS SSTTRSNSST TSNGTSNDTS NERSIVELNE 120
121 NSVSQILLPL LNHLLLILTS KKLVLFKMLQ TFNLNYYTNN LPNFYKLSNI NGDINNLTFR 180
181 DFTVIQLSNL ILDNIKFNLQ PNPIFYELIY NLLPINDEIL TSSHKNDDSH DDLILLSAKK 240
241 KSASPSAATS SHTSSSKLSY NAAMSLLYVL SKSSNKVYLT TYATPVFKTK DIPYMISPGF 300
301 KMDLLALLLR SITIFFTLYF DDAENLLFAM VRHQSITHQI NDSINSISKA LDMNPNLNSH 360
361 IMTLKQMGFN RKVQWKDFYQ FEEITDLPQV NLYSSANQQH QNQQQGQNDN RGQNQNEDPG 420
421 QENESPTPYL LFNPASLENE TPGTVKHFSS TNHDKNYQVI AFIDFKSDSN LNLQHQLEYW 480
481 PHRPQWPTPL TFTHKCKNPK YENFNEVWSG TVYLQILLRV IKQILSKVPE IPRIKSVQYF 540
541 ETLSKLSALR SDILTTIHPR LPLDVRRLTT FQPLSMHTND KLLMWFHIAT WANIFTQTSF 600
601 KYEETFSHEL RQFESLLDIS IDECEGNTIS KPTTDRLGYI RRSRGQSSVS LERTISAGSG 660
661 VSTPTMALNR TKSNGSGNLM NYFFQNTAQN HFQHLRSSSS SSSITLEKTT SNSSSIRTRP 720
721 NSHHVAPETN NNNSTNGNSN NSSNGGFSFF KWKWGGNNSN GGSDDTKASQ RDPNVSTSII 780
781 TDNLNSYMFE EEISPGVVNN IIENNIWVGT DIRLFKIANF RKESFSFLEM TSSFFKKFKF 840
841 INSDNDNYNN NEFDDNTQLR YTSRGLYR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
