| Protein: | TUS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1307 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TUS1.
| Description | E-value | Query Range |
Subject Range |
|
|
856.0 | [0..171] | [1299..157] |
|
|
692.0 | [0..1] | [1300..1] |
|
|
575.0 | [0..29] | [1297..18] |
|
|
571.0 | [0..354] | [1286..423] |
|
|
570.0 | [0..372] | [1286..559] |
|
Region A: Residues: [1-304] |
1 11 21 31 41 51
| | | | | |
1 MYRYNRSSPF ERTPEKRVSR QESQRKSIEL PKLPPLNTRN SFLDDSDNGT DNISIGWTPI 60
61 SDTQQFQSPV PQAFTFTSKH SARGNGTSSS ESTPKSTKYV KERRPPPPPP LLYSTESIRI 120
121 DSPMVSPSSQ SRERSPNKLS FIGNSEERHH MEYISNHSRI LKSPFANGFS PNSPKSPRDS 180
181 SKQQAHFSDE SDLRCHEREK ALPPIPFTTT LLLSPFDDED SEFFTKPPPP LSTSRNVSGN 240
241 SRVSEALESV YSDSDYTFNN SNARQSSFNS LLGAKPLELA PSITAPTQPF SIQSIDEHKL 300
301 YQCD
|
| Detection Method: |  |
| Confidence: | 13.25 |
| Match: | |
| Description: | No description for 1m2vB was found. |
|
Region A: Residues: [305-442] |
1 11 21 31 41 51
| | | | | |
1 NVYKLSAIYE WILKVYFEWF NECVFTKIDL FQIVQLLLEF QMPTNFDQDT IDSNVDNIMA 60
61 SFISQKAVRF DIINDEEVAV VVGGLDITGV FTELLPCYSF IDNTYGSTNS LICYSNVCTH 120
121 GQSSGFRKEI KLSEIINK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.501 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.493 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.493 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.420 | d.95.2 | Homing endonucleases |
| View | Download | 0.387 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.387 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.386 | c.108.1 | HAD-like |
| View | Download | 0.371 | d.95.2 | Homing endonucleases |
|
Region A: Residues: [443-660] |
1 11 21 31 41 51
| | | | | |
1 SVGLWTEYWH LTPDDLAEIN PREVQRQSFI FDLIILEERS LNMATAAVEI YGKRFDKSLL 60
61 PDEPEFKALA FDIFEPLIQL HTEFLLTPIF WKLKTRGKFI DGVGKIYSKW CGEAKNIYLN 120
121 YAKAMATVHE IIMWEKKNKT KFVTWLKEID NSVEITRSKM YHDVIFFGGF FKSLQNMPVT 180
181 LRSILKNTDP SMEDYEYLKI VIKEVEKLNF EVNQVHGL
|
| Detection Method: | |
| Confidence: | 84.68867 |
| Match: | 1ki1B |
| Description: | GEF of intersectin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [661-827] |
1 11 21 31 41 51
| | | | | |
1 AIDHRKLVRF SKQLVLSTNS SNATSYVNVG GSTNANDDDA IQDKLALGLT YPERKLVLSG 60
61 TVYKKRDLWL DPTPVYIALL DNCLLITEEI SKGETQKYKL IERPIPIDYL SLEKRKIPGT 120
121 SKQPLRNYSQ KEHKSPMHNF STPINSMRPL LKSSGNHMST AYGDRKT
|
| Detection Method: | |
| Confidence: | 84.68867 |
| Match: | 1ki1B |
| Description: | GEF of intersectin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [828-1307] |
1 11 21 31 41 51
| | | | | |
1 SNTEISNANP NTDEFSFKIR NTATGESFKF FTESAEVLNQ WIDAIMESFK RNAENHDLNA 60
61 FEFTVLSSEF AYFDKDAPVN LPVAPEGSEI DVALKAYAQK ANKDSCSWSK TTRILCCEDV 120
121 KFEGRIYLFV ATTDGIYVKY RDDYGSGFVK ILELNDVKRM EANVKLGLLF VLDNRKLCYF 180
181 NISTVVSRYL AQGNTLDENC IVGTVIRDKV RFFKIADDFG NSKHLFFERK GKIVILTPEF 240
241 DQLTNQVKYF KFYKEYKLPS SSNNILNNEI EDIAIFRKSF AVCTKKTVIL YQDSFEDNGI 300
301 VLPSFLNDKD MMAHLRHPHL NSLPFKSATD SKKRPSIESL TEEAKKDIAT CKAIPVNFFQ 360
361 ISQSSFFALV YDEAVVKINC YGEMSDWRKD ILLLDFCCTG ASFHGNHLIL VGDNLIQIYD 420
421 LKNVEQNLGE LVPVQIIKGK KIKLASSERR EKTILVLSHP NILNRQLLVA CNPVAMADHQ 480
481
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
