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View Structure Prediction Details

Protein: SPP382
Organism: Saccharomyces cerevisiae
Length: 708 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPP382.

Description E-value Query
Range
Subject
Range
gi|190405461 - gi|190405461|gb|EDV08728.1| hypothetical protein SCRG_04363 [Saccharomyces cerevisiae RM11-1a]
SP382_YEAST - Pre-mRNA-splicing factor SPP382 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPP382 P...
SPP382 - Essential protein that forms a dimer with Ntr2p; also forms a trimer, with Ntr2p and Prp43p, that is...
0.0 [1..708] [1..708]
gi|109451064, gi... - gi|61362057|gb|AAX42152.1| tuftelin interacting protein 11 [synthetic construct], gi|168275772|dbj|B...
TFIP11 - tuftelin interacting protein 11
HGNC:17165|MIM:6... - interacting protein 11
0.0 [6..706] [82..832]
TFP11_MOUSE - Tuftelin-interacting protein 11 OS=Mus musculus GN=Tfip11 PE=1 SV=1
0.0 [6..706] [83..833]
STIP1_ARATH - Septin and tuftelin-interacting protein 1 homolog 1 OS=Arabidopsis thaliana GN=STIPL1 PE=2 SV=1
0.0 [7..706] [146..836]
CE02118 - WBGene00007412 status:Partially_confirmed TR:Q17784 protein_id:CAA90093.1
0.0 [10..706] [86..807]
gi|3859703, gi|2... - gi|3859703|emb|CAA21978.1| unknown hypothetical protein [Candida albicans], pir||T52158 hypothetical...
0.0 [2..706] [40..721]
SPAC1486.03c - RNA-binding splicing factor
YKR3_SCHPO - G-patch domain-containing protein C1486.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN...
0.0 [2..690] [46..770]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDSDSNTDK KFFFKKRRID SYNYSDEEDN NSSMNSDMTY TNDALKTSSG NAPTISKLTK  60
   61 TYGIGAKLLS SMGYVAGKGL GKDGSGITTP IETQSRPMHN AGLGMFSNTN S

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 15.585027
Match: PF01585
Description: G-patch domain

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [112-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNYHSENEDY LSSEDEVVEG IEQVKFNKTS TEVLGEALLN DSGDMTIVRT LRELRLAGVQ  60
   61 LPESILKELD PLNAVPKPKK DV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [194-708]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VVEILQELLG IEKSLEAIRQ RTSPLEVQVK EYYGQERLLS ELEVTLRDES KHVSLYDKIG  60
   61 AILKLSDDEL IDRLTSCLLR KELLIEFDLD HLEKPNDILD ELTQIIELLA YRMDTTSKFL 120
  121 NRTQTTIFKV IYPKLKKFWE GFDMTKSKID SAITLLLDFQ QVLSFIGCKE HIMEEFVYPK 180
  181 LLQELDNWEL HDEVDHVSPR IWVLDFMVLI DDKIKDTIVD KIEAKFFAYC KNWYHRESFC 240
  241 ITNSDIIFIK ELICERRYYK ILCKEFLPKF LDELWERHND PIYELEDWKE KQEWKEKDSG 300
  301 FFYFMKKLRS YTHYFHPKQY ELMMRGTFNN INKILYQWHL YSTVEDLHKS KWWLNWLMNT 360
  361 VFEHSLPTEI ELSEIRKSYN IFAMSHRYHL DKSTLDEDFD LRQGLRNLME TQVIDDISQS 420
  421 EQEPTYTVQN IPLGKVSSSF KDVVEDYCLE KGYLISKIPN RYTQLPYGRD QDCIVPLFEI 480
  481 RNGKKKMEVA LKHDILWVED SSGTFKPIYL WALDL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [560-708]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTEIELSEIR KSYNIFAMSH RYHLDKSTLD EDFDLRQGLR NLMETQVIDD ISQSEQEPTY  60
   61 TVQNIPLGKV SSSFKDVVED YCLEKGYLIS KIPNRYTQLP YGRDQDCIVP LFEIRNGKKK 120
  121 MEVALKHDIL WVEDSSGTFK PIYLWALDL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle