| Protein: | AFG2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 780 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AFG2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [33..778] | [10..730] |
|
|
0.0 | [1..779] | [1..770] |
|
|
0.0 | [1..779] | [1..769] |
|
|
0.0 | [11..779] | [44..802] |
|
|
0.0 | [27..780] | [8..827] |
|
|
0.0 | [27..780] | [8..824] |
|
|
0.0 | [1..779] | [1..768] |
|
|
0.0 | [7..779] | [3..765] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MAPKSSSSGS KKKSSASSNS ADAKASKFKL PAEFITRPHP SKDHGKETCT AYIHPNVLSS 60
61 LEINPGSFCT VGKIGENGIL VIARAGDEEV HPVNVITLST TIRSVGNLIL GDRLELKKAQ 120
121
|
| Detection Method: |  |
| Confidence: | 766.9897 |
| Match: | 1e32A_ |
| Description: | Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [121-241] |
1 11 21 31 41 51
| | | | | |
1 VQPPYATKVT VGSLQGYNIL ECMEEKVIQK LLDDSGVIMP GMIFQNLKTK AGDESIDVVI 60
61 TDASDDSLPD VSQLDLNMDD MYGGLDNLFY LSPPFIFRKG STHITFSKET QANRKYNLPE 120
121 P
|
| Detection Method: | |
| Confidence: | 766.9897 |
| Match: | 1e32A_ |
| Description: | Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [242-413] |
1 11 21 31 41 51
| | | | | |
1 LSYAAVGGLD KEIESLKSAI EIPLHQPTLF SSFGVSPPRG ILLHGPPGTG KTMLLRVVAN 60
61 TSNAHVLTIN GPSIVSKYLG ETEAALRDIF NEARKYQPSI IFIDEIDSIA PNRANDDSGE 120
121 VESRVVATLL TLMDGMGAAG KVVVIAATNR PNSVDPALRR PGRFDQEVEI GI
|
| Detection Method: | |
| Confidence: | 766.9897 |
| Match: | 1e32A_ |
| Description: | Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [414-491] |
1 11 21 31 41 51
| | | | | |
1 PDVDARFDIL TKQFSRMSSD RHVLDSEAIK YIASKTHGYV GADLTALCRE SVMKTIQRGL 60
61 GTDANIDKFS LKVTLKDV
|
| Detection Method: | |
| Confidence: | 766.9897 |
| Match: | 1e32A_ |
| Description: | Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [492-667] |
1 11 21 31 41 51
| | | | | |
1 ESAMVDIRPS AMREIFLEMP KVYWSDIGGQ EELKTKMKEM IQLPLEASET FARLGISAPK 60
61 GVLLYGPPGC SKTLTAKALA TESGINFLAV KGPEIFNKYV GESERAIREI FRKARSAAPS 120
121 IIFFDEIDAL SPDRDGSSTS AANHVLTSLL NEIDGVEELK GVVIVAATNR PDEIDA
|
| Detection Method: | |
| Confidence: | 71.045757 |
| Match: | 1d2nA_ |
| Description: | Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [668-780] |
1 11 21 31 41 51
| | | | | |
1 ALLRPGRLDR HIYVGPPDVN ARLEILKKCT KKFNTEESGV DLHELADRTE GYSGAEVVLL 60
61 CQEAGLAAIM EDLDVAKVEL RHFEKAFKGI ARGITPEMLS YYEEFALRSG SSS
|
| Detection Method: | |
| Confidence: | 14.9 |
| Match: | 1iy2A |
| Description: | AAA domain of cell division protein FtsH |
Matching Structure (courtesy of the PDB): |
|
