| Protein: | CST9 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 482 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CST9.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..482] | [1..482] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MGGYLAIVFI PQTNTKSMRE KKQKCLKQVR RLSLISPKKY IMPDSIFEQP FVYCGVCHRR 60
61 TSHGDPLRLT SCAHILCSQH SPLTSKVCPI CRSSDISIIN LVESKQLPTD IRIFFEPLPP 120
121 LLESLYNVSQ FQLNGLSKQC QYYQNHCLKL REKCARQQQL LYQAKIELDS MAILKKRIQE 180
181 LESVLNHN
|
| Detection Method: |  |
| Confidence: | 7.39 |
| Match: | 1jm7B |
| Description: | bard1 RING domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [189-482] |
1 11 21 31 41 51
| | | | | |
1 NVSSMSVGVL PTRNSHQNHY QPPPTVDLTV DDNSLEEFEA KSFIKKLKKN SSLRNSSKNN 60
61 NGTVTPSTSG RVNKNQPLFM ETLNNPNRNS IPPPGMNPNA NSNLPNISTI AESTNLNRFS 120
121 FSPVRVAKGF DGKLPNLDIL TNNGSVSSKN ISRLSSASLQ PSSPLSSSSN RLILPNSNLK 180
181 ELHHSNTPLT STSTQFPSAL EKLKITRKRN NTISGSNRIT HNLSSHVRSS GLAFSSSSNS 240
241 LQQSKLPKSN ILKRSNSTQQ LTNTHLKSDN HLPPRSSNTV LGSSKKNNKF RRIR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [284-482] |
1 11 21 31 41 51
| | | | | |
1 MNPNANSNLP NISTIAESTN LNRFSFSPVR VAKGFDGKLP NLDILTNNGS VSSKNISRLS 60
61 SASLQPSSPL SSSSNRLILP NSNLKELHHS NTPLTSTSTQ FPSALEKLKI TRKRNNTISG 120
121 SNRITHNLSS HVRSSGLAFS SSSNSLQQSK LPKSNILKRS NSTQQLTNTH LKSDNHLPPR 180
181 SSNTVLGSSK KNNKFRRIR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
