| Protein: | CTF3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 733 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CTF3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..733] | [1..733] |
|
|
4.0E-99 | [557..733] | [1..177] |
|
Region A: Residues: [1-178] |
1 11 21 31 41 51
| | | | | |
1 MSLILDDIIL SLTNANERTP PQALKTTLSL LYEKSKQYGL SSPQLQALVR LLCETSIIDT 60
61 VTKVYIVENC FLPDGYLTKE LLLEIINHLG TPTVFSRYRI QTPPVLQSAL CKWLVHVYFL 120
121 FPVHSEREHN ISSSIWLHLW QFSFLQKWIT PLVIWQATTP VDVKPWKLSI IKRCAMHP
|
| Detection Method: |  |
| Confidence: | 2.1 |
| Match: | 1b3uA |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [179-251] |
1 11 21 31 41 51
| | | | | |
1 GYRDAPGSAT LILQRFQCLV GASSQITESI ITINCNRKTL KSHRNLKLDA HFLSILKRIL 60
61 SRAHPANFPA DTV
|
| Detection Method: | |
| Confidence: | 2.1 |
| Match: | 1b3uA |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [252-380] |
1 11 21 31 41 51
| | | | | |
1 QNTIDMYLSE IHQLGADSIY PLRLQSLPEY VPSDSTVSLW DVTSLEQLAQ NWPQLHIPND 60
61 VDYMMKPSLN SNVLLPRKVM SRDSLKHLYS SIILIKNSRD ESSSPYEWCI WQLKRCFAHQ 120
121 IETPQEVIP
|
| Detection Method: | |
| Confidence: | 2.1 |
| Match: | 1b3uA |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [381-598] |
1 11 21 31 41 51
| | | | | |
1 IIISVSSMDN KLSSRIIQTF CNLKYLKLDE LTLKKVCGGI LPLWKPELIS GTREFFVKFM 60
61 ASIFMWSTRD GHDNNCTFSE TCFYVLQMIT NWVLDDKLIA LGLTLLHDMQ SLLTLDKIFN 120
121 NATSNRFSTM AFISSLDILT QLSKQTKSDY AIQYLIVGPD IMNKVFSSDD PLLLSAACRY 180
181 LVATKNKLMQ YPSTNKFVRM QNQYIMDLTN YLYRNKVL
|
| Detection Method: | |
| Confidence: | 2.1 |
| Match: | 1b3uA |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [599-733] |
1 11 21 31 41 51
| | | | | |
1 SSKSLFGVSP DFFKQILENL YIPTADFKNA KFFTITGIPA LSYICIIILR RLETAENTKI 60
61 KFTSGIINEE TFNNFFRVHH DEIGQHGWIK GVNNIHDLRV KILMHLSNTA NPYRDIAAFL 120
121 FTYLKSLSKY SVQNS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
