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View Structure Prediction Details

Protein: OPI9
Organism: Saccharomyces cerevisiae
Length: 285 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OPI9.

Description E-value Query
Range
Subject
Range
gi|393196 - gi|393196|gb|AAA18801.1| S-antigen [Plasmodium falciparum]
0.006 [69..134] [98..164]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFESRPIVG VGGGGGACGG LLTCVGRDAE GKGGADTLGR EILELFLWWL LCAGLTEGIC  60
   61 GLFCGTFGAE APDNGSGGAG DDGTMGIGGA AEDGISGIGG AEDEGILGTA GAGDNGALGM 120
  121 GGAATDGTAP GIGGALADGE GLVLALLLIC FNFGIPPAKI SPNCGAPIPG IGGADIEGPL 180
  181 LLTVPELP

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 9.66
Match: 1la5A
Description: No description for 1la5A was found.

Predicted Domain #2
Region A:
Residues: [189-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EADETTPPPT IGALLSLVSA FFSFIPFLMS PNRASRPCIT DFAGLGALPP NAGGGGGGGG  60
   61 AGAPAISTIR YIYGRLLQQT VVRFLVVCFV SYQKLSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle