| Protein: | BUD6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 788 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUD6.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-96 | [14..780] | [1095..1855] |
|
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5.0E-95 | [14..780] | [50..810] |
|
|
7.0E-95 | [14..780] | [1097..1857] |
|
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8.0E-95 | [14..780] | [1096..1856] |
|
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9.0E-94 | [14..780] | [94..854] |
|
|
9.0E-94 | [14..780] | [1097..1857] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MKMAVDDPTY GTPKIKRTAS SSSSIETTVT KLLMSTKHLL QVLTQWSKGT TSGRLVSDAY 60
61 VQLGNDFKVV SKFFMHAKV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [80-279] |
1 11 21 31 41 51
| | | | | |
1 DMSDVGDVPM ALRRVLEVTL REPPSDETLN KHLPKIREII VTLLDKLKVK QAILKNMQQE 60
61 HRISVKSHHQ QNPSFTSNLS LGSEGTREGT PLSSRKSSIV RDQRQSDSVE NSYGEKVNST 120
121 STGTPSAQSA EATLTKPRTN IKQNLKSNNA PNASDDDDAL SQLKKGTNLQ RRASKRYSAY 180
181 HMAKLTNQST TEAAAAAGLM
|
| Detection Method: | |
| Confidence: | 2.69897 |
| Match: | 1jchA_ |
| Description: | Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [280-618] |
1 11 21 31 41 51
| | | | | |
1 TTPSPSMLHL EETVRKSKLY GNNNNDDDRN INSAENKGKS IDDVSKASPL AKTPLPIENV 60
61 RASPRRLSSV VTTSPDKAMN GTCPVFLRIG DKTKKCHVQL PTTKNALRLL FIERFAYSPG 120
121 ANSFPDIYIM DPQYGVFYEL EELNLLDIKE GFVIELKLEE NPNNTIKEFI DTVKMEISNS 180
181 QNDIIRHLKE MSFGSAISGK QTEVLPQPGL EANKHDLVGQ NKKDDDKTIK DIQYELGKIK 240
241 QVHNINRSNI NETIFNILRK VDNFKSLSFS AKNSSNRMYM EKSQTELGDL SDTLLSKVDD 300
301 LQDVIEIMRK DVAERRSQPA KKKLETVSKD LENAQADVL
|
| Detection Method: | |
| Confidence: | 14.69897 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [619-788] |
1 11 21 31 41 51
| | | | | |
1 KLQEFIDTEK PHWKKTWEAE LDKVCEEQQF LTLQEELILD LKEDLGKALE TFDLIKLCCE 60
61 EQEKNPSRSK SNPILPIMRP GTFNQVREQV MVAVQSLNPD HDSRVEAIDK AEKMWEMERK 120
121 LKASNEFDDE LENFVGNSNL KKSGGFEEVE RIRKQKDEAN LRAYFGPGFT
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
