| Protein: | YEF3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1044 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YEF3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1044] | [1..1044] |
|
|
0.0 | [1..1043] | [1..1043] |
|
|
0.0 | [2..1044] | [5..1050] |
|
|
0.0 | [2..1044] | [5..1049] |
|
|
0.0 | [2..1036] | [5..1042] |
|
|
0.0 | [7..1042] | [7..1042] |
|
|
0.0 | [15..1039] | [18..1052] |
|
Region A: Residues: [1-71] |
1 11 21 31 41 51
| | | | | |
1 MSDSQQSIKV LEELFQKLSV ATADNRHEIA SEVASFLNGN IIEHDVPEHF FGELAKGIKD 60
61 KKTAANAMQA V
|
| Detection Method: |  |
| Confidence: | 13.93 |
| Match: | 1lshA |
| Description: | Lipovitellin-phosvitin complex, superhelical domain; Lipovitellin-phosvitin complex; beta-sheet shell regions |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [72-179] |
1 11 21 31 41 51
| | | | | |
1 AHIANQSNLS PSVEPYIVQL VPAICTNAGN KDKEIQSVAS ETLISIVNAV NPVAIKALLP 60
61 HLTNAIVETN KWQEKIAILA AISAMVDAAK DQVALRMPEL IPVLSETM
|
| Detection Method: | |
| Confidence: | 13.93 |
| Match: | 1lshA |
| Description: | Lipovitellin-phosvitin complex, superhelical domain; Lipovitellin-phosvitin complex; beta-sheet shell regions |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [180-324] |
1 11 21 31 41 51
| | | | | |
1 WDTKKEVKAA ATAAMTKATE TVDNKDIERF IPSLIQCIAD PTEVPETVHL LGATTFVAEV 60
61 TPATLSIMVP LLSRGLNERE TGIKRKSAVI IDNMCKLVED PQVIAPFLGK LLPGLKSNFA 120
121 TIADPEAREV TLRALKTLRR VGNVG
|
| Detection Method: | |
| Confidence: | 13.93 |
| Match: | 1lshA |
| Description: | Lipovitellin-phosvitin complex, superhelical domain; Lipovitellin-phosvitin complex; beta-sheet shell regions |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [325-424] |
1 11 21 31 41 51
| | | | | |
1 EDDAIPEVSH AGDVSTTLQV VNELLKDETV APRFKIVVEY IAAIGADLID ERIIDQQAWF 60
61 THITPYMTIF LHEKKAKDIL DEFRKRAVDN IPVGPNFDDE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [425-662] |
1 11 21 31 41 51
| | | | | |
1 EDEGEDLCNC EFSLAYGAKI LLNKTQLRLK RARRYGICGP NGCGKSTLMR AIANGQVDGF 60
61 PTQEECRTVY VEHDIDGTHS DTSVLDFVFE SGVGTKEAIK DKLIEFGFTD EMIAMPISAL 120
121 SGGWKMKLAL ARAVLRNADI LLLDEPTNHL DTVNVAWLVN YLNTCGITSI TISHDSVFLD 180
181 NVCEYIINYE GLKLRKYKGN FTEFVKKCPA AKAYEELSNT DLEFKFPEPG YLEGVKTK
|
| Detection Method: | |
| Confidence: | 105.0 |
| Match: | 1g291_ |
| Description: | Maltose transport protein MalK, C-terminal domain; Maltose transport protein MalK, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [663-686] |
1 11 21 31 41 51
| | | | | |
1 QKAIVKVTNM EFQYPGTSKP QITD
|
|
Region B: Residues: [707-806] |
1 11 21 31 41 51
| | | | | |
1 KSTLINVLTG ELLPTSGEVY THENCRIAYI KQHAFAHIES HLDKTPSEYI QWRFQTGEDR 60
61 ETMDRANRQI NENDAEAMNK IFKIEGTPRR IAGIHSRRKF
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1e69A_ |
| Description: | Smc head domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [687-706] |
1 11 21 31 41 51
| | | | | |
1 INFQCSLSSR IAVIGPNGAG
|
|
Region B: Residues: [807-975] |
1 11 21 31 41 51
| | | | | |
1 KNTYEYECSF LLGENIGMKS ERWVPMMSVD NAWIPRGELV ESHSKMVAEV DMKEALASGQ 60
61 FRPLTRKEIE EHCSMLGLDP EIVSHSRIRG LSGGQKVKLV LAAGTWQRPH LIVLDEPTNY 120
121 LDRDSLGALS KALKEFEGGV IIITHSAEFT KNLTEEVWAV KDGRMTPSG
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1e69A_ |
| Description: | Smc head domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [976-1044] |
1 11 21 31 41 51
| | | | | |
1 HNWVSGQGAG PRIEKKEDEE DKFDAMGNKI AGGKKKKKLS SAELRKKKKE RMKKKKELGD 60
61 AYVSSDEEF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
