| Protein: | ERF2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 359 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF2.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-95 | [1..359] | [1..359] |
|
|
1.0E-67 | [41..343] | [15..314] |
|
|
5.0E-63 | [43..341] | [7..306] |
|
|
1.0E-62 | [43..341] | [24..323] |
|
Region A: Residues: [1-163] |
1 11 21 31 41 51
| | | | | |
1 MALVSRRSTR SESTSITKEE HTGEGSLTKL FFRWLVTLEG DQDINDGKGY ISLPNVSNYI 60
61 FFLGGRFRTV KGAKPLWLGV LLAIVCPMVL FSIFEAHKLW HTQNGYKVLV IFFYYFWVIT 120
121 LASFIRTATS DPGVLPRNIH LSQLRNNYQI PQEYYNLITL PTH
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.459 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.513 | a.26.1 | 4-helical cytokines |
| View | Download | 0.473 | a.25.1 | Ferritin-like |
| View | Download | 0.478 | a.26.1 | 4-helical cytokines |
| View | Download | 0.415 | a.63.1 | Apolipophorin-III |
| View | Download | 0.401 | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.378 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.361 | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.338 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.310 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.300 | a.26.1 | 4-helical cytokines |
| View | Download | 0.300 | a.25.1 | Ferritin-like |
| View | Download | 0.283 | a.63.1 | Apolipophorin-III |
| View | Download | 0.280 | a.26.1 | 4-helical cytokines |
| View | Download | 0.274 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.273 | a.25.1 | Ferritin-like |
| View | Download | 0.265 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.262 | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.254 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.252 | a.26.1 | 4-helical cytokines |
| View | Download | 0.250 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.229 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.228 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.226 | a.24.12 | Outer surface protein C (OspC) |
| View | Download | 0.225 | a.26.1 | 4-helical cytokines |
| View | Download | 0.217 | a.63.1 | Apolipophorin-III |
| View | Download | 0.217 | a.47.2 | t-snare proteins |
| View | Download | 0.216 | a.1.1 | Globin-like |
| View | Download | 0.215 | a.7.4 | Smac/diablo |
| View | Download | 0.209 | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.207 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.206 | a.25.1 | Ferritin-like |
| View | Download | 0.201 | a.148.1 | Arp2/3 complex 21 kDa subunit ARPC3 |
| Term | Confidence | Notes |
| transporter activity | 1.29200212594063 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.08174821699506 | bayes_pls_golite062009 |
| protein binding | 0.646210551989356 | bayes_pls_golite062009 |
| binding | 0.50942388426238 | bayes_pls_golite062009 |
| catalytic activity | 0.481338897251745 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.304549276964021 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.295075718640555 | bayes_pls_golite062009 |
| NADH dehydrogenase (ubiquinone) activity | 0.00673253349876157 | bayes_pls_golite062009 |
|
Region A: Residues: [164-297] |
1 11 21 31 41 51
| | | | | |
1 SSISKDITIK YCPSCRIWRP PRSSHCSTCN VCVMVHDHHC IWVNNCIGKR NYRFFLIFLL 60
61 GAILSSVILL TNCAIHIARE SGGPRDCPVA ILLLCYAGLT LWYPAILFTY HIFMAGNQQT 120
121 TREFLKGIGS KKNP
|
| Detection Method: | |
| Confidence: | 37.008774 |
| Match: | PF01529 |
| Description: | DHHC zinc finger domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [298-359] |
1 11 21 31 41 51
| | | | | |
1 VFHRVVKEEN IYNKGSFLKN MGHLMLEPRG PSFVSARKPH EAGDWRFMDL SPAHSFEKIQ 60
61 KI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.333 | b.36.1 | PDZ domain-like |
| View | Download | 0.318 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.273 | b.84.1 | Single hybrid motif |
| View | Download | 0.544 | d.9.2 | Description not found. |
| View | Download | 0.392 | d.9.2 | Description not found. |
| View | Download | 0.259 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.247 | b.89.1 | Cyanovirin-N |
| View | Download | 0.242 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.241 | b.55.1 | PH domain-like |
| View | Download | 0.229 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.222 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.202 | b.55.1 | PH domain-like |
| View | Download | 0.201 | g.27.1 | Fibronectin type I module |
| View | Download | 0.201 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
