| Protein: | ECM22 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 814 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECM22.
| Description | E-value | Query Range |
Subject Range |
|
|
514.0 | [0..1] | [814..41] |
|
|
477.0 | [0..262] | [813..375] |
|
|
475.0 | [0..7] | [813..16] |
|
|
463.0 | [0..97] | [814..171] |
|
|
390.0 | [0..4] | [530..943] |
|
|
388.0 | [0..4] | [505..942] |
|
|
376.0 | [0..4] | [526..960] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MTSDDGNAGQ EREKDAELIE VGGKKVSKTS TGKRKFHNKS KTGCDNCKRR RVKCDEGKPF 60
61 CKKCTNMKLD CVYSPIQPRR RKDSSSSKFA SAVHDRVGKK NLSDNAIMLQ QQQQQLHHQQ 120
121 EQQFRQQQQV QLQQQLLPHV GTDEQSNSPN SVPPSVSNNM E
|
| Detection Method: |  |
| Confidence: | 54.927757 |
| Match: | 1pyiA |
| Description: | PPR1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [162-547] |
1 11 21 31 41 51
| | | | | |
1 NLLLPHLLAS LVNNTSNSTN SSANGAEAHN NITQTAPSSM INNNHPNMAL PGNSPLSIPI 60
61 TPSFQSTAMN LSSSLNGLLS PGRLNSVTNG LQQPQLQQQN QQIPQQQGTQ SPFSNIPFDQ 120
121 LAQLNKMGLN FNMKSFNTLF PYGAANGMAS EFQELFGLGK FATSNNRAIK VSTAEEALAN 180
181 MQQEQEDKNK QFTKNPLDNT KTDAVNSGNN PLNGNENKVT ASDILSHNKN LIIDNTGLTI 240
241 SPPHTLSKPS IDQNIASPST GVSNVTSTKS LLSIPDNRTA LGNSPTLKTS PMGDLLSNSE 300
301 ALSPRSSNSH TQQQSSPHSN ASSASRLVPE LVGLSRKSNL NLIDLKLFHH YCTDVWHTIT 360
361 EAGISGPEVW STYIPDLAFH FPFLMH
|
| Detection Method: | |
| Confidence: | 8.46 |
| Match: | |
| Description: | No description for 1i3qA was found. |
|
Region A: Residues: [548-656] |
1 11 21 31 41 51
| | | | | |
1 TILAFSATHL SRTEAGLDNY VSSHRLEALR LLREAVLEIS DDNTDALVAS ALILILDSLA 60
61 NASSSSPTAW IFHVKGAVTI LTAVWPLSET SKFYNLISVD LSDLGEAVI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.958 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.958 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.956 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.956 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.950 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.950 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.920 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.920 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.904 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.896 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
|
Region A: Residues: [657-814] |
1 11 21 31 41 51
| | | | | |
1 NQSNHNNDND NSNNGDGNNN NTISELVCFD ESIADLYPVE IDSPYLITLA YLDKLHREKN 60
61 QLDFMLRVFS FPALLDRTFL ALLMTGDLGA MRIMRSYYTL LRGYTTEIKD KVWFLDSVSQ 120
121 VLPQDVDEYS GGGGMHMMLD FLGGGLPSMT TTNFSAFM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.923 | a.118.8 | TPR-like |
| View | Download | 0.852 | a.118.1 | ARM repeat |
| View | Download | 0.852 | a.118.1 | ARM repeat |
| View | Download | 0.823 | a.7.14 | Description not found. |
| View | Download | 0.781 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.781 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.757 | a.118.19 | Description not found. |
| View | Download | 0.693 | a.7.8 | GAT domain |
| View | Download | 0.463 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.440 | a.278.1 | Description not found. |
| View | Download | 0.408 | d.379.1 | Description not found. |
| View | Download | 0.385 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.369 | a.7.8 | GAT domain |
