| Protein: | IFH1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1085 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IFH1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1085] | [1..1085] |
|
|
8.0E-50 | [1..699] | [868..1603] |
|
|
1.0E-49 | [1..699] | [869..1604] |
|
|
1.0E-48 | [1..689] | [871..1596] |
|
|
3.0E-48 | [1..713] | [861..1611] |
|
|
2.0E-47 | [1..713] | [862..1612] |
|
Region A: Residues: [1-406] |
1 11 21 31 41 51
| | | | | |
1 MAGKKSPRKS TINHSTHSGK LPANIKRLIK KGESDTKSRQ SPPTLSTTRP RRFSLIYSSE 60
61 SSLSDVSDSD KNKSTNPHKI KRKAKNISNN SQGKKSKLIQ RQIDNDDEGT ESSDYQAVTD 120
121 GEESENEEEE SEEEEEDDDE DDDDDDDDGS DSDSDSETSS DDENIDFVKL TAQRKKRAMK 180
181 ALSAMNTNSN TLYSSRENSN KNKSVKLSPK KENEEEQKEE KEKEKEEQQK QQESNKKEVN 240
241 GSGTTTTQQA LSFKFKKEDD GISFGNGNEG YNEDIGEEVL DLKNKENNGN EEDKLDSKVM 300
301 LGNNDELRFP NISESDESEY DIDQDAYFDV INNEDSHGEI GTDLETGEDD LPILEEEEQN 360
361 IVSELQNDDE LSFDGSIHEE GSDPVEDAEN KFLQNEYNQE NGYDEE
|
| Detection Method: |  |
| Confidence: | 27.045757 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [407-756] |
1 11 21 31 41 51
| | | | | |
1 DDEEDEIMSD FDMPFYEDPK FANLYYYGDG SEPKLSLSTS LPLMLNDEKL SKLKKKEAKK 60
61 REQEERKQRR KLYKKTQKPS TRTTSNVDND EYIFNVFFQS DDENSGHKSK KGRHKSGKSH 120
121 IEHKNKGSNL IKSNDDLEPS THSTVLNSGK YDSSDDEYDN ILLDVAHMPS DDECSESETS 180
181 HDADTDEELR ALDSDSLDIG TELDDDYEDD DDDSSVTNVF IDIDDLDPDS FYFHYDSDGS 240
241 SSLISSNSDK ENSDGSKDCK HDLLETVVYV DDESTDEDDN LPPPSSRSKN IGSKAKEIVS 300
301 SNVVGLRPPK LGTWETDNKP FSIIDGLSTK SLYALIQEHQ QLREQHQRAQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [757-1085] |
1 11 21 31 41 51
| | | | | |
1 TPDVKREGSS NGNNGDELTL NELLNMSELE DDSPSHTDDM ENNYNDAINS KSTNGHAADW 60
61 YEVPKVPLSA FRNKGINAYE EDEYMIPANS NRKVPIGYIG NERTRKKIDK MKELQRKKTE 120
121 KKRQLKKKKK LLKIRKQRQK AIKEQETMNL QLGINGHEII GNNNSHSDIN TGTDFTTNEN 180
181 TPMNELPSHA PEDASLIPHN SDLAVDSNTR KNSTKSVGLD EIHEILGKDE NDLLSVGDIN 240
241 GYDAQEGHVI EDTDADILAS LTAPVQFDNT LSHENSNSMW RRRQSMVEAA AENLRFTKNG 300
301 LFSESALADI EGIMGNDVNH SFEFNDVLQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
