YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: TFS1
Organism: Saccharomyces cerevisiae
Length: 219 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TFS1.

Description E-value Query
Range		 Subject
Range
gi|4612 - gi|4612|emb|CAA44015.1| TFS1 [Saccharomyces cerevisiae]
 1.0E-63 [1..219] [1..219]
CET2_TOBAC - CEN-like protein 2 OS=Nicotiana tabacum GN=CET2 PE=2 SV=1
 5.0E-49 [7..219] [1..169]
OV16_ONCVO - OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2
 4.0E-48 [13..219] [35..196]
gi|4903139 - gi|4903139|dbj|BAA77836.1| CiFT [Citrus unshiu]
 2.0E-46 [7..219] [1..167]
SELFP_SOLLC - Protein SELF-PRUNING OS=Solanum lycopersicum GN=SP PE=2 SV=1
 6.0E-46 [7..219] [1..169]
ENSPTRT00000010122 - null
PEBP1 - phosphatidylethanolamine binding protein 1
 7.0E-46 [22..217] [11..172]
FT_ARATH - Protein FLOWERING LOCUS T OS=Arabidopsis thaliana GN=FT PE=1 SV=2
 7.0E-46 [7..219] [1..167]

Back

Predicted Domain #1
Region A:
Residues: [1-219] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQAIDFAQA SIDSYKKHGI LEDVIHDTSF QPSGILAVEY SSSAPVAMGN TLPTEKARSK  60
   61 PQFQFTFNKQ MQKSVPQANA YVPQDDDLFT LVMTDPDAPS KTDHKWSEFC HLVECDLKLL 120
  121 NEATHETSGA TEFFASEFNT KGSNTLIEYM GPAPPKGSGP HRYVFLLYKQ PKGVDSSKFS 180
  181 KIKDRPNWGY GTPATGVGKW AKENNLQLVA SNFFYAETK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 146.69897
Match: 1bd9A_
Description: Phosphatidylethanolamine binding protein, PEBP
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle