| Protein: | UPS2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 230 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UPS2.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-87 | [1..230] | [1..230] |
|
|
4.0E-67 | [2..197] | [3..201] |
|
|
8.0E-66 | [1..179] | [2..179] |
|
|
2.0E-65 | [1..179] | [2..179] |
|
|
9.0E-59 | [1..199] | [1..197] |
|
Region A: Residues: [1-230] |
1 11 21 31 41 51
| | | | | |
1 MKLFQNSYDF NYPWDQVTAA NWKKYPNEIS THVIAVDVLR RELKDQGKVL VTERLITVKQ 60
61 GVPKWIMMML GGTNMSHVRE VSVVDLNKKS LTMRSCNLTM CNLLKVYETV TYSPHPDDSA 120
121 NKTLFQQEAQ ITAYGSIRKL CNKMEDWSVQ RFCENAKKGK MGFDAVLQVF SENWEKHVDD 180
181 LSNQLVSKVN ETMEDVKISA GTLLKGTERS GRTILQQNID LFRDAYNHEN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.543 | N/A | N/A | f.4.1 | OMPA-like |
| View | Download | 0.391 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.388 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.384 | N/A | N/A | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.361 | N/A | N/A | a.1.1 | Globin-like |
|
Region A: Residues: [148-230] |
1 11 21 31 41 51
| | | | | |
1 SVQRFCENAK KGKMGFDAVL QVFSENWEKH VDDLSNQLVS KVNETMEDVK ISAGTLLKGT 60
61 ERSGRTILQQ NIDLFRDAYN HEN
|
| Detection Method: | |
| Confidence: | 1.05 |
| Match: | 1xq8A |
| Description: | Human micelle-bound alpha-synuclein |
Matching Structure (courtesy of the PDB): |
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