YRC Public Data Repository - Protein Structure Prediction

Protein:	ACF2
Organism:	Saccharomyces cerevisiae
Length:	779 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACF2.

Description	E-value	Query Range	Subject Range
ENG2_YEAST - Endo-1,3(4)-beta-glucanase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ACF2 PE=1 S... gi\|151941305 - gi\|151941305\|gb\|EDN59683.1\| assembly complementing factor [Saccharomyces cerevisiae YJM789] ACF2 - Intracellular beta-1,3-endoglucanase, expression is induced during sporulation; may have a role in c...	0.0	[1..779]	[1..779]
gi\|6562336 - gi\|6562336\|emb\|CAB62580.1\| endo-1,3-beta-glucanase [Candida albicans] gi\|68478570, gi\|... - gi\|68478570\|ref\|XP_716667.1\| hypothetical protein CaO19.10921 [Candida albicans SC5314], gi\|46438341...	0.0	[36..778]	[18..732]
eng1 - endo-1,3-beta-glucanase Eng1 ENG1_SCHPO - Endo-1,3(4)-beta-glucanase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=eng1 PE=3 SV=...	0.0	[49..778]	[21..737]
gi\|10937881 - gi\|10937881\|gb\|AAF13033.2\|AF121133_1 beta(1-3)endoglucanase [Aspergillus fumigatus]	0.0	[71..777]	[14..722]
gi\|15237207, gi\|... - gi\|9755633\|emb\|CAC01786.1\| putative protein [Arabidopsis thaliana], gi\|15237207\|ref\|NP_197091.1\| gly...	0.0	[50..769]	[16..703]

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Predicted Domain #1

Region A:
Residues: [1-208]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCYSRQAIPP PVPNRPGGTT NRGPPPLPPR ANVQPPVCSS ENSSKPRENR VAGESLRTPS  60
   61 SSNPLADSQV NSDNIFQSPV LSNLKAPPSV FNKVQHPVPK PNIDDQSVDP LETNKFYTNM 120
  121 LLDDNTQPIW THPYSIWFSR DPELFGLAAN HTLASQRVFD TTTNPPRFYF NPTNIKSFVF 180
  181 KAREFVSSND IKLEFRDMKH MSMCLLMS

[Run NCBI BLAST on this sequence.]

Detection Method:	ORFEUS
Confidence:	8.57
Match:	1ldvA
Description:	No description for 1ldvA was found.

Predicted Domain #2

Region A:
Residues: [209-779]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSSSQFIEFP LVQGMGFVTA IYHDLGFELR SAVGFRSLER ISVNERYGKY NIQLENNRNW  60
   61 ILYLTSPDYS FPQDFQISLL DSNTIISSHK INGLICQLSA DSVPSIDMAA GCYPVYCDLS 120
  121 GQTVDEHFTN YRFNYTVAGY SQSGTTLMYA LPHHKAAFTP EMQEREIASS LDSTVKGLMT 180
  181 GYLTNSFDMQ VQVPQELGFE PVALSLNKKA DYSQEKLSKI REAAVQEVQL SDPQQESNID 240
  241 SMYFSGKILA KYAWILYVTH YILHDENLTK ELLSKLTIAM ERFISNQQVL PLNYDVSWKG 300
  301 IISSGSSSQD FGNSYYNDHH FHYSYHVITA AIISLVDSDL SGVTNNSWLE NNRDWVECLI 360
  361 RDYSGVDNDD PYFPQFRSFD WFNGHSWAKG LFPSGDGKDE ESTSEDVNSC YAIKLWGLVT 420
  421 GNSKLTDIAN LQLGIMRNVF QSYFLYESNN TVQPKEFIGN KVSGILFENK IDHATYFGME 480
  481 PQYIHMIHAI PITSASSWVR TPNFVKEEWE EKMQPIIDQV NDGWKGIIML NMALLDPKFS 540
  541 YDFFSQPDFN RNFLDNGQSL TWSLAYSGAF S

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	1000.0
Match:	PF03639
Description:	Glycosyl hydrolase family 81

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits