| Protein: | NHA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 985 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NHA1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..985] | [1..985] |
|
|
0.0 | [4..772] | [89..885] |
|
|
0.0 | [7..693] | [75..763] |
|
|
0.0 | [4..702] | [89..813] |
|
|
0.0 | [4..702] | [93..818] |
|
|
0.0 | [4..878] | [3..788] |
|
|
0.0 | [4..702] | [93..818] |
|
|
0.0 | [4..702] | [89..814] |
|
Region A: Residues: [1-321] |
1 11 21 31 41 51
| | | | | |
1 MAIWEQLEVS KAHVAYACVG VFSSIFSLVS LYVKEKLYIG ESTVAGIFGL IVGPVCLNWF 60
61 NPLKWGNSDS ITLEITRIVL CLQIFAVAVE LPRKYMLKHW VSVTMLLLPV MTAGWLIIGL 120
121 FVWILIPGLN FSASLLISAC ITATDPILAQ SVVSGKFAQR VPGHLRNLLS AESGCNDGMA 180
181 FPFLFLSMNL ILHPGNGREI VKDWICVTIL YECLFGCLLG CFIGYVGRIT IRFAEKKNII 240
241 DRESFLAFYV VLAFMCAGFG SILGVDDLLV SFAAGATFAW DGWFSQKTQE SNVSTVIDLL 300
301 LNYAYFIYFG AIIPWSQFNN G
|
| Detection Method: |  |
| Confidence: | 4.69897 |
| Match: | 1fftA_ |
| Description: | Cytochrome O ubiquinol oxidase, subunit I |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [322-404] |
1 11 21 31 41 51
| | | | | |
1 EIGTNVWRLI ILSIVVIFLR RIPAVMILRP LIPDIKSWRE ALFVGHFGPI GVGAIFAAIL 60
61 ARGELESTFS DEPTPLNVVP SKE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [405-985] |
1 11 21 31 41 51
| | | | | |
1 ESKHWQLIAC IWPITCFFIV TSIIVHGSSV AIITLGRHLN TITLTKTFTT HTTNGDNGKS 60
61 SWMQRLPSLD KAGRSFSLHR MDTQMTLSGD EGEAEEGGGR KGLAGGEDEE GLNNDQIGSV 120
121 ATSGIPARPA GGMPRRRKLS RKEKRLNRRQ KLRNKGREIF SSRSKNEMYD DDELNDLGRE 180
181 RLQKEKEARA ATFALSTAVN TQRNEEIGMG GDEEEDEYTP EKEYSDNYNN TPSFESSERS 240
241 SSLRGRTYVP RNRYDGEETE SEIESEDEME NESERSMASS EERRIRKMKE EEMKPGTAYL 300
301 DGNRMIIENK QGEILNQVDI EDRNEARDDE VSVDSTAHSS LTTTMTNLSS SSGGRLKRIL 360
361 TPTSLGKIHS LVDKGKDKNK NSKYHAFKID NLLIIENEDG DVIKRYKINP HKSDDDKSKN 420
421 RPRNDSVVSR ALTAVGLKSK ANSGVPPPVD EEKAIEGPSR KGPGMLKKRT LTPAPPRGVQ 480
481 DSLDLEDEPS SEEDLGDSYN MDDSEDYDDN AYESETEFER QRRLNALGEM TAPADQDDEE 540
541 LPPLPVEAQT GNDGPGTAEG KKKQKSAAVK SALSKTLGLN K
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [485-658] |
1 11 21 31 41 51
| | | | | |
1 MDTQMTLSGD EGEAEEGGGR KGLAGGEDEE GLNNDQIGSV ATSGIPARPA GGMPRRRKLS 60
61 RKEKRLNRRQ KLRNKGREIF SSRSKNEMYD DDELNDLGRE RLQKEKEARA ATFALSTAVN 120
121 TQRNEEIGMG GDEEEDEYTP EKEYSDNYNN TPSFESSERS SSLRGRTYVP RNRY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [659-985] |
1 11 21 31 41 51
| | | | | |
1 DGEETESEIE SEDEMENESE RSMASSEERR IRKMKEEEMK PGTAYLDGNR MIIENKQGEI 60
61 LNQVDIEDRN EARDDEVSVD STAHSSLTTT MTNLSSSSGG RLKRILTPTS LGKIHSLVDK 120
121 GKDKNKNSKY HAFKIDNLLI IENEDGDVIK RYKINPHKSD DDKSKNRPRN DSVVSRALTA 180
181 VGLKSKANSG VPPPVDEEKA IEGPSRKGPG MLKKRTLTPA PPRGVQDSLD LEDEPSSEED 240
241 LGDSYNMDDS EDYDDNAYES ETEFERQRRL NALGEMTAPA DQDDEELPPL PVEAQTGNDG 300
301 PGTAEGKKKQ KSAAVKSALS KTLGLNK
|
| Detection Method: | |
| Confidence: | 5.30103 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
