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View Structure Prediction Details

Protein: CCW12
Organism: Saccharomyces cerevisiae
Length: 133 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCW12.

Description E-value Query
Range
Subject
Range
FLO5 - Lectin-like cell wall protein (flocculin) involved in flocculation, binds to mannose chains on the s...
FLO5_YEAST - Flocculation protein FLO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLO5 PE=1 SV=1
94.0 [0..4] [109..868]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFSTVASIA AVAAVASAAA NVTTATVSQE STTLVTITSC EDHVCSETVS PALVSTATVT  60
   61 VDDVITQYTT WCPLTTEAPK NGTSTAAPVT STEAPKNTTS AAPTHSVTSY TGAAAKALPA 120
  121 AGALLAGAAA LLL

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle