Protein: | ARP6 |
Organism: | Saccharomyces cerevisiae |
Length: | 438 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARP6.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [2..432] | [5..376] |
|
0.0 | [2..432] | [5..376] |
|
0.0 | [2..432] | [3..374] |
|
0.0 | [2..432] | [5..376] |
|
0.0 | [2..432] | [4..375] |
|
0.0 | [2..432] | [5..376] |
|
0.0 | [2..432] | [5..376] |
Region A: Residues: [1-133] |
1 11 21 31 41 51 | | | | | | 1 METPPIVIDN GSYEIKFGPS TNKKPFRALN ALAKDKFGTS YLSNHIKNIK DISSITFRRP 60 61 HELGQLTLWE LESCIWDYCL FNPSEFDGFD LKEGKGHHLV ASESCMTLPE LSKHADQVIF 120 121 EEYEFDSLFK SPV |
Region B: Residues: [396-438] |
1 11 21 31 41 51 | | | | | | 1 GWEVMSQFAK TDSYRKARVT REEYYEHGPD WCTKHRFGYQ NWI |
Detection Method: | |
Confidence: | 372.9794 |
Match: | 1yagA_ |
Description: | Actin |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [134-395] |
1 11 21 31 41 51 | | | | | | 1 AVFVPFTKSY KGEMRTISGK DEDIDIVRGN SDSTNSTSSE SKNAQDSGSD YHDFQLVIDS 60 61 GFNCTWIIPV LKGIPYYKAV KKLDIGGRFL TGLLKETLSF RHYNMMDETI LVNNIKEQCL 120 121 FVSPVSYFDS FKTKDKHALE YVLPDFQTSF LGYVRNPRKE NVPLPEDAQI ITLTDELFTI 180 181 PETFFHPEIS QITKPGIVEA ILESLSMLPE IVRPLMVGNI VCTGGNFNLP NFAQRLAAEL 240 241 QRQLPTDWTC HVSVPEGDCA LF |
Detection Method: | |
Confidence: | 372.9794 |
Match: | 1yagA_ |
Description: | Actin |
Matching Structure (courtesy of the PDB): |