| Protein: | RGR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1082 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RGR1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1082] | [1..1082] |
|
|
0.0 | [79..427] | [3..324] |
|
|
0.0 | [79..427] | [3..324] |
|
|
5.0E-99 | [66..416] | [25..340] |
|
|
8.0E-98 | [70..416] | [35..346] |
|
|
9.0E-88 | [104..424] | [26..323] |
|
|
4.0E-40 | [282..429] | [1..127] |
|
Region A: Residues: [1-224] |
1 11 21 31 41 51
| | | | | |
1 MTTTIGSPQM LANEERLSNE MHALKNRSEQ NGQEQQGPVK NTQLHGPSAT DPETTATQKE 60
61 SLEMVPKDTS AATMTSAPPP ALPHVEINQV SLALVIRNLT VFTMKELAQY MKTNVHTQAN 120
121 EPNSAKKIRF LQLIIFLRTQ FLKLYVLVKW TRTIKQNNFH VLIDLLNWFR TTNMNVNNCI 180
181 WALKSSLNSM TNAKLPNVDL VTALEVLSLG RPNLPTHNFK LSGV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [225-443] |
1 11 21 31 41 51
| | | | | |
1 SNSMDMVDGM AKVPIGLILQ RLKDLNLTVS IKIALMNIPK PLNSYHIKNG RIYFTVPNEF 60
61 EIQLSTVNRQ SPLFFVDLKL LFNTEAEQTV SAVTEATSTN GDSENNEENS SSNGNNLPLN 120
121 KPRLEKLINE ILLKSNDPLL SLYNFLHKYV LTLQLYMVHR EFLKLANGGK FSKSNLIHNY 180
181 DSKKSTITVR YWLNGKMDSK GKITIGIQRT TESLILKWD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [444-1082] |
1 11 21 31 41 51
| | | | | |
1 NQSASRAKNM PVIYNNIVSN IEGILDEIMF NHARIIRSEL LARDIFQEDE ENSDVLLFQL 60
61 PTTCVSMAPI QLKIDLLSGQ FYFRNPTPLL SNYASKINRA EGPEELARIL QQLKLDKIIH 120
121 VLTTMFENTG WSCSRIIKID KPIRTQVNTG GESVVKKEDN KYAIAGNSTT NSDVSLLLQR 180
181 DLFIRLPHWP LNWYLILSII SSKTSCVVEK RIGKIVSQRG KWNLKYLDNS NVMTVKLESI 240
241 TYQKIMILQR TILNRIINHM LIDSLNQLEI RNKICSSEMI NEQKLPQYII QGSNTNDNIS 300
301 IITLELESFL EGSKALNSIL ESSMFLRIDY SNSQIRLYAK FKRNTMMIQC QIDKLYIHFV 360
361 QEEPLAFYLE ESFTNLGIIV QYLTKFRQKL MQLVVLTDVV ERLHKNFESE NFKIIALQPN 420
421 EISFKYLSNN DEDDKDCTIK ISTNDDSIKN LTVQLSPSNP QHIIQPFLDN SKMDYHFIFS 480
481 YLQFTSSLFK ALKVILNERG GKFHESGSQY STMVNIGLHN LNEYQIVYYN PQAGTKITIC 540
541 IELKTVLHNG RDKIQFHIHF ADVAHITTKS PAYPMMHQVR NQVFMLDTKR LGTPESVKPA 600
601 NASHAIRLGN GVACDPSEIE PILMEIHNIL KVDSNSSSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
