| Protein: | SMF3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 473 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SMF3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [4..472] | [57..530] |
|
|
0.0 | [4..472] | [51..524] |
|
|
0.0 | [2..472] | [47..522] |
|
|
0.0 | [6..473] | [65..537] |
|
|
0.0 | [6..473] | [65..537] |
|
Region A: Residues: [1-473] |
1 11 21 31 41 51
| | | | | |
1 MRSYMQILQK FAKFIGPGIL VSVAYMDPGN YATSVSGGAQ YKYTLLFSIF ISNIFAVLLQ 60
61 CLCVKLGTIT GYDLAENCRH NLPKKLNYTL YLFAEVAIIA TDLAEVVGTA IALQILFKIP 120
121 LTWGVLLTVL DVLVILMFYT PNGQSLKKVR VFEFGVGILV IGTCICFVLE LFKVSIPDKA 180
181 ELFKGFLPSN IIFKEQQALY ISLGILGATV MPHSLYLGSS IVKPRLHDYD LKKYGKVNAR 240
241 PSLSAIKYTL NYAYAELIIS LFLIATFVNS AILIVAGATL SGQPEAEDAD LLSIYKLLVH 300
301 YISPAAGLIF ALAMLCSGQS AGIICTLAGQ IVSEGFLQWS LPPWATRLCT RLIAIVPCLF 360
361 VTLTMGEKGI SDILNFSQVV LSLILPIVSA PLIYFTANRK LMVVHDENGV VRAPADVNAI 420
421 ADETTPLNSK HSKIVDFTNS RLLTYTSVFV WALIGSLNCY LVISYLLGAD IHF
|
| Detection Method: |  |
| Confidence: | 226.017729 |
| Match: | PF01566 |
| Description: | Natural resistance-associated macrophage protein |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [211-260] |
1 11 21 31 41 51
| | | | | |
1 MPHSLYLGSS IVKPRLHDYD LKKYGKVNAR PSLSAIKYTL NYAYAELIIS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [261-338] |
1 11 21 31 41 51
| | | | | |
1 LFLIATFVNS AILIVAGATL SGQPEAEDAD LLSIYKLLVH YISPAAGLIF ALAMLCSGQS 60
61 AGIICTLAGQ IVSEGFLQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [339-473] |
1 11 21 31 41 51
| | | | | |
1 WSLPPWATRL CTRLIAIVPC LFVTLTMGEK GISDILNFSQ VVLSLILPIV SAPLIYFTAN 60
61 RKLMVVHDEN GVVRAPADVN AIADETTPLN SKHSKIVDFT NSRLLTYTSV FVWALIGSLN 120
121 CYLVISYLLG ADIHF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
