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View Structure Prediction Details

Protein: PSR2
Organism: Saccharomyces cerevisiae
Length: 397 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSR2.

Description E-value Query
Range
Subject
Range
gi|207343198 - gi|207343198|gb|EDZ70734.1| YLR019Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|151941187 - gi|151941187|gb|EDN59565.1| protein phosphatase [Saccharomyces cerevisiae YJM789]
PSR2 - Functionally redundant Psr1p homolog, a plasma membrane phosphatase involved in the general stress r...
PSR2_YEAST - Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PSR2 PE=1 SV=1
0.0 [1..397] [1..397]
CTDSL_CHICK - CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2 SV=2
gi|542165764|ref... - PREDICTED: CTD small phosphatase-like protein isoform X2 [Zonotrichia albicollis]
gi|224044589 - gi|224044589|ref|XP_002196491.1| PREDICTED: CTD (carboxy-terminal domain, RNA polymerase II, polypep...
1.0E-84 [114..395] [2..271]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
1.0E-81 [114..395] [77..334]
gi|168279031 - gi|168279031|dbj|BAG11395.1| carboxy-terminal domain RNA polymerase II polypeptide A small phosphata...
gi|109097527 - gi|109097527|ref|XP_001116527.1| PREDICTED: nuclear LIM interactor-interacting factor 2 isoform 2 [M...
gi|67967557 - gi|67967557|dbj|BAE00261.1| unnamed protein product [Macaca fascicularis]
CTDSP2 - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
gi|114644094 - gi|114644094|ref|XP_001167131.1| PREDICTED: nuclear LIM interactor-interacting factor 2 [Pan troglod...
1.0E-76 [158..394] [32..266]
ttm50-PA - The gene tiny tim 50 is referred to in FlyBase by the symbol Dmel\ttm50 (CG2713, FBgn0250874). It is...
gi|220953446, gi... - gi|220953446|gb|ACL89266.1| ttm50-PA [synthetic construct], gi|220943268|gb|ACL84177.1| ttm50-PA [sy...
2.0E-76 [77..394] [84..380]
CTDS1_MOUSE - Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Mus musculus GN=Ctdsp...
5.0E-76 [114..393] [2..254]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFIANILCC SSDTSKTHRQ RQPPETNHNR NRNRKHSSNK AQTQGRKQKA TPNGDKMQYS  60
   61 TPEILLSSSD SGSNAGSKTM QENGNSGNGK LAPLSRDHSN NSYDEEKEYE DYNEGDVEMT 120
  121 EVNNAGEEEE EDDEAKEKQD HVVHEYNVDA DRNSSINDEA PPQQGLYQVG QEDMNPQYVA 180
  181 SSPDNDLN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [189-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LIPTTEEDFS DLTHLQPDQY HAPGYDTLLP PKLQEFQQKK CLILDLDETL VHSSFKYMHS  60
   61 ADFVLPVEID DQVHNVYVIK RPGVDEFLNR VSQLYEVVVF TASVSRYANP LLDTLDPNGT 120
  121 IHHRLFREAC YNYEGNYIKN LSQIGRPLSE TIILDNSPAS YIFHPQHAVP ISSWFSDTHD 180
  181 NELLDIIPLL EDLSSGNVLD VGSVLDVTI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 110.657577
Match: PF03031
Description: NLI interacting factor-like phosphatase

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle