Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLR001C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..862] | [1..862] |
|
|
0.0 | [10..779] | [2..774] |
|
|
0.0 | [22..653] | [86..675] |
|
|
0.0 | [22..655] | [86..677] |
|
|
0.0 | [22..655] | [86..677] |
|
|
0.0 | [22..655] | [85..676] |
|
|
0.0 | [22..655] | [79..669] |
|
|
0.0 | [37..631] | [101..653] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MNMAIQTIKY IFWLLPILGL TQALLQNPGD DFPFSTVIDI LSENVEFSTF LRIIQKTGHV 60
61 QYLNELQNFT LFAPINSAFI KGDQTTDQFE EHFHIEDFLI HDRVLQVRDL ENGTYLEKRA 120
121 AKAPLLLRKH ERHCFVNEIA VVEPDLLPSF QNASLQGINN LLLIQPQINE LLVQLDEETQ 180
181 DLKIFSDFIS SFSNYNA
|
| Detection Method: |  |
| Confidence: | 2.244125 |
| Match: | PF02469 |
| Description: | Fasciclin domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 0.437329334769699 | bayes_pls_golite062009 |
|
Region A: Residues: [198-282] |
1 11 21 31 41 51
| | | | | |
1 YTNSSTVLVP LDVNFRKFFN TIEINYLLDK YNKLGKSNTI SQAKWAADRT SLLQELIIDD 60
61 VYGGILPKEL ILENKNNRKL FMKSN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.674 | a.77.1 | DEATH domain |
| View | Download | 0.407 | a.74.1 | Cyclin-like |
| View | Download | 0.372 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.372 | a.77.1 | DEATH domain |
| View | Download | 0.365 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.364 | a.112.1 | Description not found. |
| View | Download | 0.341 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.340 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.336 | a.46.1 | Methionine synthase domain |
| View | Download | 0.314 | a.149.1 | RNase III endonuclease catalytic domain |
| View | Download | 0.312 | a.28.1 | ACP-like |
| View | Download | 0.311 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.298 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.285 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.281 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.276 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.267 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.264 | a.74.1 | Cyclin-like |
| View | Download | 0.260 | a.64.1 | Saposin |
| View | Download | 0.260 | d.58.48 | MTH1187-like |
| View | Download | 0.258 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.258 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.253 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.252 | a.118.1 | ARM repeat |
| View | Download | 0.245 | a.29.2 | Bromodomain |
| View | Download | 0.243 | a.64.1 | Saposin |
| View | Download | 0.242 | d.15.5 | Staphylokinase/streptokinase |
| View | Download | 0.239 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.238 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.236 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.232 | a.20.1 | PGBD-like |
| View | Download | 0.223 | g.53.1 | TAZ domain |
| View | Download | 0.222 | a.4.12 | TrpR-like |
| View | Download | 0.218 | a.64.1 | Saposin |
| View | Download | 0.212 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.212 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.212 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.206 | a.47.2 | t-snare proteins |
| View | Download | 0.204 | a.24.4 | Hemerythrin |
| View | Download | 0.202 | a.66.1 | Transducin (alpha subunit), insertion domain |
|
Region A: Residues: [283-661] |
1 11 21 31 41 51
| | | | | |
1 SEGTSVSVNN SDYSPISNRI FEIGVVHGFS DLDFLRTHIQ FDAEKYLHGL NCSEFVKELY 60
61 FRDLEKFIQN GRKITIFVPQ ASFNEDRGYT KPSLLYHFVE GKIDLEQDFS SLRPIQYAPT 120
121 QIYDSAFCSS AKRLGGHCQK FKITRSNKGY YINGRFKILN TKPYEIGNTS IYSIDDDLQL 180
181 PGDLVLSLAP ENHCSISLML LKELNLLDLP SNHKGYTILL PCMNSWDNND LTIDYLRSNK 240
241 TALNLLMRNL IFEDLIYSNN YSISTTVKNL YGNSVSIGVQ KIVGSQNLTK ISVSTIKESI 300
301 IIEESSDIFF NQGVIHPIDQ LDFPVDLEIS LKELIETTGT KEIFDFFNLF YDLSSIIWNN 360
361 EEYSLLVPTA SSIPLSGIT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [662-801] |
1 11 21 31 41 51
| | | | | |
1 ANSTNLRKFL ELHLIPANVT QNLLDCNGSI STKLGTKLNC RKDHLDNVFV SIQGDWTKEV 60
61 RVLKTGCTTN LKSSCIFLID KPISLSWLNS EKYHLRLPGI AVGFGVIIGV TIAISLLFCI 120
121 IITRGGKVKD KNQRGRNDRA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [802-862] |
1 11 21 31 41 51
| | | | | |
1 TTPLIQHSPI IHNPSYSATA HLSPLSQPTF EGSYSVNAIQ TPRDIRRVGS DQKGGRSVST 60
61 S
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.225 | 0.007 | fungal-type vacuole membrane | a.139.1 | Type I dockerin domain |
