| Protein: | YLL016W |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1048 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLL016W.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1048] | [206..1250] |
|
|
0.0 | [1..1048] | [206..1253] |
|
|
0.0 | [117..1043] | [200..1089] |
|
|
0.0 | [495..1033] | [532..1078] |
|
|
0.0 | [495..1033] | [515..1061] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MPITSSPDLF YLNDCDVVYW YDLTRLVCHY VNLTERDLLA NEREKFLTSL DLLTAQITYV 60
61 YMLFRNLRLV EDSFKKTLKK LIYTLSRFSI NANIWFHSTL FEEREAIASQ KDPERRSPLL 120
121 QSILGTFQKF HFLLRLLHFL SNPNELTILP QLTPRFFK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [159-526] |
1 11 21 31 41 51
| | | | | |
1 DSFNTISWNN PFLRKRLNQH MSHDLPRQMI KAVAGASGIV AENIDEIPAS KQGTSCSSET 60
61 SHHSPSAPFQ RRRRGTIFSN VSGSSDESDT IWSKRKKPYP LNEETLSLVR ARKKQLDGKL 120
121 KQMIKSANEY LSNTANFSKM LNFEMNFKTY EEVSGTIPII DILENLDLTI FLNLRELGDE 180
181 NRVFDEDVAI DDEDEEFLKH SLSSLSYILS DYFNMKQYFH DVVVKFIIVA QHLTLEDPFV 240
241 FSPMQNDLPT GYYEPMKPSS LNLDNAKDKK NGSQNTDIQE EEDEYEPDPD SLILFHNLIN 300
301 QDSDFNDLKF FNLAHVFKKS CDDYFDVLKL AIEFVNQLIL ERENLLNYAA RMMKNNITEL 360
361 LLRGEEGY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [527-709] |
1 11 21 31 41 51
| | | | | |
1 GSYDGGETAE KSDTNAVYAD SDTKDNDEWR DSQVKLPRYL QREYDSELIW GSNNRIKGGS 60
61 KHALISYLTD NEKKDLFFDI TFLITFRSIF TTTEFLSYLI SQYNLDPPED LCFEEYNEWV 120
121 TKKLIPVKCR VVEIMTTFFK QYWFLGYDEP DLATLNLDYF AQVAIKENIT GSVELLKEVN 180
181 QKF
|
|
Region B: Residues: [911-947] |
1 11 21 31 41 51
| | | | | |
1 TFTDSGNPDY LVLEHGLKGV HDEKKYINFN KRSRLVD
|
| Detection Method: | |
| Confidence: | 382.9794 |
| Match: | 1bkdS_ |
| Description: | Son of sevenless protein homolog 1 (sos-1) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [710-910] |
1 11 21 31 41 51
| | | | | |
1 KHGNIQEATA PMKTLDQQIC QDHYSGTLYS TTESILAVDP VLFATQLTIL EHEIYCEITI 60
61 FDCLQKIWKN KYTKSYGASP GLNEFISFAN KLTNFISYSV VKEADKSKRA KLLSHFIFIA 120
121 EYCRKFNNFS SMTAIISALY SSPIYRLEKT WQAVIPQTRD LLQSLNKLMD PKKNFINYRN 180
181 ELKSLHSAPC VPFFGVYLSD L
|
|
Region B: Residues: [948-1048] |
1 11 21 31 41 51
| | | | | |
1 ILQEIIYFKK THYDFTKDRT VIECISNSLE NIPHIEKQYQ LSLIIEPKPR KKVVPNSNSN 60
61 NKSQEKSRDD QTDEGKTSTK KDRFPKFQLH KTKKKAPKVS K
|
| Detection Method: | |
| Confidence: | 382.9794 |
| Match: | 1bkdS_ |
| Description: | Son of sevenless protein homolog 1 (sos-1) |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.597587183571285 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.32323692785606 | bayes_pls_golite062009 |
| protein binding | 0.29116370406325 | bayes_pls_golite062009 |
