Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLL007C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..665] | [1..665] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MKHNRQMPDE SLENIKVLLN PKLGKPVKSL TSAQSKACYH TLISNKNLNK TSDEYEKLLA 60
61 NYILLCDEKY LCKTVIPDSR FWAILCDNCQ KLRSETLVAN LIRIFNVALK CQDSN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.360 | d.41.4 | Ribosomal protein L10e |
| View | Download | 0.452 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.394 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.544 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.441 | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.350 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.341 | b.88.1 | Mss4-like |
| View | Download | 0.339 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.337 | c.55.3 | Ribonuclease H-like |
| View | Download | 0.312 | a.77.1 | DEATH domain |
| View | Download | 0.304 | a.74.1 | Cyclin-like |
| View | Download | 0.302 | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.300 | a.26.1 | 4-helical cytokines |
| View | Download | 0.297 | a.4.12 | TrpR-like |
| View | Download | 0.294 | a.74.1 | Cyclin-like |
| View | Download | 0.293 | a.4.12 | TrpR-like |
| View | Download | 0.293 | d.94.1 | HPr-like |
| View | Download | 0.266 | a.118.15 | Aconitase B, N-terminal domain |
| View | Download | 0.263 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.262 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.255 | a.4.12 | TrpR-like |
| View | Download | 0.237 | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.237 | a.1.1 | Globin-like |
| View | Download | 0.237 | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.236 | a.29.2 | Bromodomain |
| View | Download | 0.225 | d.232.1 | Mago nashi protein |
| View | Download | 0.213 | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.210 | a.24.3 | Cytochromes |
| View | Download | 0.209 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.206 | d.58.16 | Poly(A) polymerase, C-terminal domain |
| View | Download | 0.203 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.201 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
|
Region A: Residues: [116-302] |
1 11 21 31 41 51
| | | | | |
1 KNEVIVSICH ISRENSQLIG ILLQLLSQRP IHIPLFTDTI LCITLFLKCS LTLCETSLSH 60
61 AVEFVPRILI LLFQYNFPAS MSELLYIEDL QPLILEEFVP LKQRLINFLS SVSIDDYSCS 120
121 LKADLLTAIK DNSVFQKGLE MEMGDLPSIN LLNAYDTFTF LNSPNGSFKR LYTEQLLFGE 180
181 NDFPLYE
|
|
Region B: Residues: [355-471] |
1 11 21 31 41 51
| | | | | |
1 LRFWIESLAK SQSDLVSLLN LAIITLKYVC LSSSDLEAAI QTKSLLKTQV VALDSMRYKF 60
61 ARTLQLDSIK KEQYRTWSSS IASFDTMLSG QVRDYVRHQR LLQLQKGTWV YAENPLN
|
| Detection Method: | |
| Confidence: | 7.59 |
| Match: | 1qoyA |
| Description: | Hemolysin E (HlyE, ClyA, SheA) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [303-354] |
1 11 21 31 41 51
| | | | | |
1 AIFKLSDQFR RLFNLSGKKE NQYSDSERDL KLQIATAVLN RQTCFYKTLE LF
|
| Detection Method: | |
| Confidence: | 7.59 |
| Match: | 1qoyA |
| Description: | Hemolysin E (HlyE, ClyA, SheA) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [472-665] |
1 11 21 31 41 51
| | | | | |
1 PEAGTPKVYF LIVSDNHANL LAREFETQTN DLPYLFDNKI LTSPGSEALA NGRTKVVVLK 60
61 HITSFKSIEL TTPSRRTSSN VYIKLDEANV YTGVELKDRN DRTVLKFYLD TEEGRYIWLD 120
121 GLKLISPFQH EDISEDTKEQ IDTLFDLRKN VQMINLNVRQ DIIVPPPEPS DEDEDEEFYN 180
181 LETLKKVTQN FYFD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.373 | b.60.1 | Lipocalins |
| View | Download | 0.495 | b.29.1 | Concanavalin A-like lectins/glucanases |
| View | Download | 0.434 | c.1.2 | Ribulose-phoshate binding barrel |
| View | Download | 0.439 | c.1.6 | PLP-binding barrel |
| View | Download | 0.365 | b.60.1 | Lipocalins |
| View | Download | 0.346 | c.1.11 | Enolase C-terminal domain-like |
| View | Download | 0.342 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.341 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.329 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.321 | d.157.1 | Metallo-hydrolase/oxidoreductase |
| View | Download | 0.315 | d.220.1 | Metal cation-transporting ATPase, ATP-binding domain N |
| View | Download | 0.280 | b.60.1 | Lipocalins |
| View | Download | 0.264 | b.60.1 | Lipocalins |
| View | Download | 0.257 | c.45.1 | (Phosphotyrosine protein) phosphatases II |
| View | Download | 0.247 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.244 | b.78.1 | alpha-D-mannose-specific plant lectins |
| View | Download | 0.237 | d.142.1 | Glutathione synthetase ATP-binding domain-like |
| View | Download | 0.206 | b.68.4 | TolB, C-terminal domain |
| Term | Confidence | Notes |
| binding | 1.14406613230923 | bayes_pls_golite062009 |
| protein binding | 0.749738289794699 | bayes_pls_golite062009 |
