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View Structure Prediction Details

Protein: SFI1
Organism: Saccharomyces cerevisiae
Length: 946 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SFI1.

Description E-value Query
Range
Subject
Range
gi|6635201 - gi|6635201|dbj|BAA25468.2| KIAA0542 protein [Homo sapiens]
687.0 [0..190] [805..108]
gi|114685952, gi... - gi|114685952|ref|XP_001148585.1| PREDICTED: spindle assembly associated Sfi1 homolog isoform 10 [Pan...
678.0 [0..190] [805..106]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKFGTTNKS TENLLRDKFV PETSPTNIPT DVLIKQGQIT DSTESLIHGG AERYIVNALK  60
   61 PIELNKTEGF FEDPPFHLPS PPVDSTNLEY EDVTDL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKNGLRYDLN DISVEVIEDL YRQIEAFLVH FKLSRSFLQI FKNYVNILIQ EGINPLRDEY  60
   61 FTILEDELKG FFTFNSVIEE ILEIFLIHPR NKFIALSLAE YTYAKNKIRR HFNHWKTVCE 120
  121 LNEEANRFAN QAKLRVQEAV FYIWSDKTLK YSQMANDEAE SFRN

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 12.7
Match:
Description: No description for 1qgkA was found.

Predicted Domain #3
Region A:
Residues: [261-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TWLLFRSFQQ WITLTQTLKE QSRLADQAFL NKMFRKILKA QEHWKHLETV NTDNIKKIFL  60
   61 RTTFHIWKLR HKEINYHGLE RRIFERIKQK VINYEYNKSI AEKVRSFSLQ RKYLNKWEKK 120
  121 NIENEDKLGA LYELENKFIK QKFFRKLNRS FQHSQQEAIA KSKLNQTLLR CVFEKMWLKR 180
  181 FEDHLHLYSI VSLK

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 12.7
Match:
Description: No description for 1qgkA was found.

Predicted Domain #4
Region A:
Residues: [455-546]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EANLVKRIFH SWKKLLYIDL KASDYSRTNL LKSSLRSWKL EVKLKIFEQK CKKSIQASAY  60
   61 RTWRKRIQYG KISSEHVKTA FCAKYLGVWK RR

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 12.7
Match:
Description: No description for 1qgkA was found.

Predicted Domain #5
Region A:
Residues: [547-655]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQMNSMNDE ASKFYEEGLV NECLAIWKER LIKTKELEDR YNFLCKTHAI LTVKRTLMHI  60
   61 DNVHLLYTKL APSMDRVKLS KAFLKWRKAT RFKVRHKLND ILHVYEKSK

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 12.7
Match:
Description: No description for 1qgkA was found.

Predicted Domain #6
Region A:
Residues: [656-813]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERELQSQLFN AWRNRFCFYT EECNIQAISK RNYQLEKMVL KKFRERLLEI VKSEELADEV  60
   61 REEFVLVKTF YIWKTHLDEI FYMSTLLEQS EANKQFIITS KFLKMWSLRF LKIKRNDETV 120
  121 EVFRHRWDRA TVRGLLLLWK NRSDSSPKRR KDFNLKHE

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 12.7
Match:
Description: No description for 1qgkA was found.

Predicted Domain #7
Region A:
Residues: [814-946]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKTPIRSDSQ NASTIPGSER IKQHRMEAMK SHYSRARRAI PSPVKSSSVL DSTAKKQINL  60
   61 ESTTGLNGSP TRGKPLRYSP RRTTRNMPSK VDHIDFGRIP AVPFSLSANS PKIDQDMDYI 120
  121 REHDKSPLSR KRQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle