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View Structure Prediction Details

Protein: SKG1
Organism: Saccharomyces cerevisiae
Length: 241 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SKG1.

Description E-value Query
Range
Subject
Range
AIM20 - Putative protein of unknown function; overexpression causes a cell cycle delay or arrest; green fluo...
AIM20_YEAST - Altered inheritance of mitochondria protein 20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S28...
5.0E-43 [4..125] [3..103]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTASTSVAVG CAVGIPVGVG IIIAVCFWFN LQKRYKREEQ DDRELERAIY DESGFVSFDN  60
   61 FGPLRDSKDE AALASSELKN PDHTSGSSEG SAHPEEKDGK SRDQEKPLGK KNSKYYVPAY 120
  121 RRKINLLQVR NNNYGNNARQ KSVVDLPSIN NSSNVSLSSS QRHITKRQIS VYDQMVPVIS 180
  181 DE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [183-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPNFFADPSS DTNTSNDQNK ASMIELKHNT RQSSNENLIR NLQNQDFGSY YQGELHPRF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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