| Protein: | SKG1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 241 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SKG1.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-43 | [4..125] | [3..103] |
|
Region A: Residues: [1-182] |
1 11 21 31 41 51
| | | | | |
1 MTASTSVAVG CAVGIPVGVG IIIAVCFWFN LQKRYKREEQ DDRELERAIY DESGFVSFDN 60
61 FGPLRDSKDE AALASSELKN PDHTSGSSEG SAHPEEKDGK SRDQEKPLGK KNSKYYVPAY 120
121 RRKINLLQVR NNNYGNNARQ KSVVDLPSIN NSSNVSLSSS QRHITKRQIS VYDQMVPVIS 180
181 DE
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [183-241] |
1 11 21 31 41 51
| | | | | |
1 GPNFFADPSS DTNTSNDQNK ASMIELKHNT RQSSNENLIR NLQNQDFGSY YQGELHPRF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.276 | a.3.1 | Cytochrome c |
| View | Download | 0.277 | a.77.1 | DEATH domain |
| View | Download | 0.366 | a.64.1 | Saposin |
| View | Download | 0.290 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.278 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.267 | a.4.1 | Homeodomain-like |
| View | Download | 0.233 | d.58.17 | Metal-binding domain |
| View | Download | 0.233 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.215 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.200 | a.4.1 | Homeodomain-like |
