Protein: | ESL2 |
Organism: | Saccharomyces cerevisiae |
Length: | 1195 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ESL2.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [276..1195] | [208..1118] |
|
0.002 | [97..257] | [30..190] |
|
0.002 | [190..260] | [74..147] |
|
0.005 | [63..250] | [49..238] |
|
0.006 | [153..310] | [405..555] |
|
0.007 | [191..268] | [475..552] |
|
0.007 | [55..250] | [92..287] |
Region A: Residues: [1-1019] |
1 11 21 31 41 51 | | | | | | 1 MPETSVQNPL RLSENENTRS MFLSASQQQR PSATPSFPRL VRNTTANLSL SDFQVLNPSS 60 61 KRQNSNSVYD DINSSKRRIS RPRFSDIEGK NNDHTYPERT TVKESEKNPS PRYVSSSKRA 120 121 LKRENSVGIT QSSALISKSF SENGGSIAHE KWSPENMIKP LNVSQNSLAF VDAGSDEQSK 180 181 SEIVGGFQRK SNNSQEINDK DNSARDQDFN NSGNNNNNNN HSSNNNDNNN NNNDDNNNNN 240 241 NSNSRDNNNN SDDSNEREEN DSCKPASNKR SGIALIQKLQ ELYKVIVKQE IELQERCSQL 300 301 TNSQTTELKS LWTIYKINTD LVNNYVTFIT TALLPSQPPH DLVIGQEIVE IYRIERRLWV 360 361 YGTITFLDVL KNFSNFMDPE VCCQFITHVF VSLSTMISDI PSKYSITWLQ RLGDLSRMAI 420 421 ALYPSSFIDW KLSAEHWYTE AMKYIYNHGK LYYHMSTVQQ NTLEAFVNLG KSVFCQETFT 480 481 PSPQYMQLVI DNIYQRAFVE RNNGNLRNSL LIEYLKHSEA MLLPSFLESP DLQNVVLSYF 540 541 IEKFGIDANG CNIFNAEDMF VQNPDFFKYF FRHGPSFAQS HILQIVGFGE PKNPFAILFE 600 601 LPKYLKERKD KKERKKSSNN DSSVTESSTG NSRNDNEDDD EIMSSTTSIS DHDLLAEFFN 660 661 DIDTLRRPIL PSMLTNEAWL ETLKFLNMTS LKCGIIVLRK FLHGPLGIAL PHILPWIYFI 720 721 ISICLKSSQL SDPVSKEFWM IIVKRAFPWD TMVTFMNVLI VYLLDNQTSN SIIGDLCDDY 780 781 DKLSLSELLE LFNEGEELPE ILGCWGTLWF DTICEKNTHS ISSEDNFQEI GIKDYMALDS 840 841 PTDGIIFDEK DENGEKFWKR ACRTIFLFRE LSRSFPIGVI IRNDPLIYRS SFQNTNILGS 900 901 LVFKLEPLCN IHNNIPVLGA LESIIDISEA RSENNTDLHA VPELSVNEGD NIFHYVGYKK 960 961 LRADYTCFDK NGEFLSASLY TTWYVPNSNN TNIEDNINYN SEKENEGLFL ECIKSDYPE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1020-1195] |
1 11 21 31 41 51 | | | | | | 1 IDFKTTYFVF DATSWLRHSA RIFKLAQNRL LRFAICLTTF QELRFLRKSK DENVMEAATR 60 61 GIITIRQLYY ENKVLPLRFT GNVATHIEEN LEFEEQITWR THVDEFVIES VMKAQEKLES 120 121 ASEPRLSPRR FNYVVLISDD DAMKKKAEEK EIKTLSTRFV FSLCTKLGEQ RHLCTD |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [271-891] |
1 11 21 31 41 51 | | | | | | 1 SGIALIQKLQ ELYKVIVKQE IELQERCSQL TNSQTTELKS LWTIYKINTD LVNNYVTFIT 60 61 TALLPSQPPH DLVIGQEIVE IYRIERRLWV YGTITFLDVL KNFSNFMDPE VCCQFITHVF 120 121 VSLSTMISDI PSKYSITWLQ RLGDLSRMAI ALYPSSFIDW KLSAEHWYTE AMKYIYNHGK 180 181 LYYHMSTVQQ NTLEAFVNLG KSVFCQETFT PSPQYMQLVI DNIYQRAFVE RNNGNLRNSL 240 241 LIEYLKHSEA MLLPSFLESP DLQNVVLSYF IEKFGIDANG CNIFNAEDMF VQNPDFFKYF 300 301 FRHGPSFAQS HILQIVGFGE PKNPFAILFE LPKYLKERKD KKERKKSSNN DSSVTESSTG 360 361 NSRNDNEDDD EIMSSTTSIS DHDLLAEFFN DIDTLRRPIL PSMLTNEAWL ETLKFLNMTS 420 421 LKCGIIVLRK FLHGPLGIAL PHILPWIYFI ISICLKSSQL SDPVSKEFWM IIVKRAFPWD 480 481 TMVTFMNVLI VYLLDNQTSN SIIGDLCDDY DKLSLSELLE LFNEGEELPE ILGCWGTLWF 540 541 DTICEKNTHS ISSEDNFQEI GIKDYMALDS PTDGIIFDEK DENGEKFWKR ACRTIFLFRE 600 601 LSRSFPIGVI IRNDPLIYRS S |
Detection Method: | ![]() |
Confidence: | 2.16 |
Match: | 1ya0A |
Description: | Crystal structure of the N-terminal domain of human SMG7 |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
binding | 1.26999948840808 | bayes_pls_golite062009 |
protein binding | 0.305336743191506 | bayes_pls_golite062009 |
Region A: Residues: [892-988] |
1 11 21 31 41 51 | | | | | | 1 FQNTNILGSL VFKLEPLCNI HNNIPVLGAL ESIIDISEAR SENNTDLHAV PELSVNEGDN 60 61 IFHYVGYKKL RADYTCFDKN GEFLSASLYT TWYVPNS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [989-1195] |
1 11 21 31 41 51 | | | | | | 1 NNTNIEDNIN YNSEKENEGL FLECIKSDYP EIDFKTTYFV FDATSWLRHS ARIFKLAQNR 60 61 LLRFAICLTT FQELRFLRKS KDENVMEAAT RGIITIRQLY YENKVLPLRF TGNVATHIEE 120 121 NLEFEEQITW RTHVDEFVIE SVMKAQEKLE SASEPRLSPR RFNYVVLISD DDAMKKKAEE 180 181 KEIKTLSTRF VFSLCTKLGE QRHLCTD |
Detection Method: | ![]() |
Confidence: | 3.58 |
Match: | 2dokA |
Description: | No description for 2dokA was found. |