| Protein: | ESL2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1195 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ESL2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [276..1195] | [208..1118] |
|
|
0.002 | [97..257] | [30..190] |
|
|
0.002 | [190..260] | [74..147] |
|
|
0.005 | [63..250] | [49..238] |
|
|
0.006 | [153..310] | [405..555] |
|
|
0.007 | [191..268] | [475..552] |
|
|
0.007 | [55..250] | [92..287] |
|
Region A: Residues: [1-1019] |
1 11 21 31 41 51
| | | | | |
1 MPETSVQNPL RLSENENTRS MFLSASQQQR PSATPSFPRL VRNTTANLSL SDFQVLNPSS 60
61 KRQNSNSVYD DINSSKRRIS RPRFSDIEGK NNDHTYPERT TVKESEKNPS PRYVSSSKRA 120
121 LKRENSVGIT QSSALISKSF SENGGSIAHE KWSPENMIKP LNVSQNSLAF VDAGSDEQSK 180
181 SEIVGGFQRK SNNSQEINDK DNSARDQDFN NSGNNNNNNN HSSNNNDNNN NNNDDNNNNN 240
241 NSNSRDNNNN SDDSNEREEN DSCKPASNKR SGIALIQKLQ ELYKVIVKQE IELQERCSQL 300
301 TNSQTTELKS LWTIYKINTD LVNNYVTFIT TALLPSQPPH DLVIGQEIVE IYRIERRLWV 360
361 YGTITFLDVL KNFSNFMDPE VCCQFITHVF VSLSTMISDI PSKYSITWLQ RLGDLSRMAI 420
421 ALYPSSFIDW KLSAEHWYTE AMKYIYNHGK LYYHMSTVQQ NTLEAFVNLG KSVFCQETFT 480
481 PSPQYMQLVI DNIYQRAFVE RNNGNLRNSL LIEYLKHSEA MLLPSFLESP DLQNVVLSYF 540
541 IEKFGIDANG CNIFNAEDMF VQNPDFFKYF FRHGPSFAQS HILQIVGFGE PKNPFAILFE 600
601 LPKYLKERKD KKERKKSSNN DSSVTESSTG NSRNDNEDDD EIMSSTTSIS DHDLLAEFFN 660
661 DIDTLRRPIL PSMLTNEAWL ETLKFLNMTS LKCGIIVLRK FLHGPLGIAL PHILPWIYFI 720
721 ISICLKSSQL SDPVSKEFWM IIVKRAFPWD TMVTFMNVLI VYLLDNQTSN SIIGDLCDDY 780
781 DKLSLSELLE LFNEGEELPE ILGCWGTLWF DTICEKNTHS ISSEDNFQEI GIKDYMALDS 840
841 PTDGIIFDEK DENGEKFWKR ACRTIFLFRE LSRSFPIGVI IRNDPLIYRS SFQNTNILGS 900
901 LVFKLEPLCN IHNNIPVLGA LESIIDISEA RSENNTDLHA VPELSVNEGD NIFHYVGYKK 960
961 LRADYTCFDK NGEFLSASLY TTWYVPNSNN TNIEDNINYN SEKENEGLFL ECIKSDYPE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1020-1195] |
1 11 21 31 41 51
| | | | | |
1 IDFKTTYFVF DATSWLRHSA RIFKLAQNRL LRFAICLTTF QELRFLRKSK DENVMEAATR 60
61 GIITIRQLYY ENKVLPLRFT GNVATHIEEN LEFEEQITWR THVDEFVIES VMKAQEKLES 120
121 ASEPRLSPRR FNYVVLISDD DAMKKKAEEK EIKTLSTRFV FSLCTKLGEQ RHLCTD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [271-891] |
1 11 21 31 41 51
| | | | | |
1 SGIALIQKLQ ELYKVIVKQE IELQERCSQL TNSQTTELKS LWTIYKINTD LVNNYVTFIT 60
61 TALLPSQPPH DLVIGQEIVE IYRIERRLWV YGTITFLDVL KNFSNFMDPE VCCQFITHVF 120
121 VSLSTMISDI PSKYSITWLQ RLGDLSRMAI ALYPSSFIDW KLSAEHWYTE AMKYIYNHGK 180
181 LYYHMSTVQQ NTLEAFVNLG KSVFCQETFT PSPQYMQLVI DNIYQRAFVE RNNGNLRNSL 240
241 LIEYLKHSEA MLLPSFLESP DLQNVVLSYF IEKFGIDANG CNIFNAEDMF VQNPDFFKYF 300
301 FRHGPSFAQS HILQIVGFGE PKNPFAILFE LPKYLKERKD KKERKKSSNN DSSVTESSTG 360
361 NSRNDNEDDD EIMSSTTSIS DHDLLAEFFN DIDTLRRPIL PSMLTNEAWL ETLKFLNMTS 420
421 LKCGIIVLRK FLHGPLGIAL PHILPWIYFI ISICLKSSQL SDPVSKEFWM IIVKRAFPWD 480
481 TMVTFMNVLI VYLLDNQTSN SIIGDLCDDY DKLSLSELLE LFNEGEELPE ILGCWGTLWF 540
541 DTICEKNTHS ISSEDNFQEI GIKDYMALDS PTDGIIFDEK DENGEKFWKR ACRTIFLFRE 600
601 LSRSFPIGVI IRNDPLIYRS S
|
| Detection Method: | |
| Confidence: | 2.16 |
| Match: | 1ya0A |
| Description: | Crystal structure of the N-terminal domain of human SMG7 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.26999948840808 | bayes_pls_golite062009 |
| protein binding | 0.305336743191506 | bayes_pls_golite062009 |
|
Region A: Residues: [892-988] |
1 11 21 31 41 51
| | | | | |
1 FQNTNILGSL VFKLEPLCNI HNNIPVLGAL ESIIDISEAR SENNTDLHAV PELSVNEGDN 60
61 IFHYVGYKKL RADYTCFDKN GEFLSASLYT TWYVPNS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [989-1195] |
1 11 21 31 41 51
| | | | | |
1 NNTNIEDNIN YNSEKENEGL FLECIKSDYP EIDFKTTYFV FDATSWLRHS ARIFKLAQNR 60
61 LLRFAICLTT FQELRFLRKS KDENVMEAAT RGIITIRQLY YENKVLPLRF TGNVATHIEE 120
121 NLEFEEQITW RTHVDEFVIE SVMKAQEKLE SASEPRLSPR RFNYVVLISD DDAMKKKAEE 180
181 KEIKTLSTRF VFSLCTKLGE QRHLCTD
|
| Detection Method: | |
| Confidence: | 3.58 |
| Match: | 2dokA |
| Description: | No description for 2dokA was found. |
