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View Structure Prediction Details

Protein: CCP1
Organism: Saccharomyces cerevisiae
Length: 361 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCP1.

Description E-value Query
Range
Subject
Range
gi|7453855 - gi|7453855|gb|AAF63027.1|AF244924_1 peroxidase prx15 precursor [Spinacia oleracea]
0.0 [49..359] [4..332]
gi|5002342 - gi|5002342|gb|AAD37427.1|AF149277_1 peroxidase 1 precursor [Phaseolus vulgaris]
0.0 [58..360] [1..319]
gi|55700873, gi|... - gi|7242902|dbj|BAA92500.1| putative PRX [Oryza sativa Japonica Group], gi|55700873|tpe|CAH69246.1| T...
0.0 [55..359] [4..331]
gi|14031051 - gi|14031051|gb|AAK52085.1| peroxidase [Nicotiana tabacum]
0.0 [59..359] [13..329]
PER15_IPOBA - Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1
0.0 [50..359] [1..327]
PER72_ARATH - Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1
0.0 [42..359] [1..333]
gi|19698446 - gi|19698446|gb|AAL93151.1|AF485265_1 class III peroxidase [Gossypium hirsutum]
0.0 [50..359] [1..320]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [55..359] [10..333]

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Predicted Domain #1
Region A:
Residues: [1-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTAVRLLPS LGRTAHKRSL YLFSAAAAAA AAATFAYSQS QKRSSSSPGG GSNHGWNNWG  60
   61 KAAALASTTP LVHVASVEKG RSYEDFQKVY NAIALKLRED DEYDNYIGYG PVLVRLAWHT 120
  121 SGTWDKHDNT GGSYGGTYRF KKEFNDPSNA GLQNGFKFLE PIHKEFPWIS SGDLFSLGGV 180
  181 TAVQEMQGPK IPWRCGRVDT PEDTTPDNGR L

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [330-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKAFEKLLEN GITFPKDAPS PFIFKTLEEQ GL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1812.69897
Match: 2cyp__
Description: Cytochrome c peroxidase, CCP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peroxidase activity 4.90562236110392 bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor 4.90562236110392 bayes_pls_golite062009
antioxidant activity 4.72975331779519 bayes_pls_golite062009
oxidoreductase activity 3.43598009905644 bayes_pls_golite062009
catalase activity 1.75972879470996 bayes_pls_golite062009
binding 0.661610825383382 bayes_pls_golite062009
catalytic activity 0.190481430370391 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [212-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDADKDADYV RTFFQRLNMN DREVVALMGA HALGKTHLKN SGYEGPWGAA NNVFTNEFYL  60
   61 NLLNEDWKLE KNDANNEQWD SKSGYMMLPT DYSLIQDPKY LSIVKEYAND QDKFFKDF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1812.69897
Match: 2cyp__
Description: Cytochrome c peroxidase, CCP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle