| Protein: | OSH6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 448 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OSH6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..448] | [1..448] |
|
|
0.0 | [15..445] | [374..800] |
|
|
0.0 | [6..433] | [3..428] |
|
Region A: Residues: [1-448] |
1 11 21 31 41 51
| | | | | |
1 MGSKKLTVGS DSHRLSKSSF SSNKSSHSAT KDQPIDTDDI DEDDESGHNI ILNIISQLRP 60
61 GCDLTRITLP TFILEKKSML ERVTNQLQFP EFLLQAHSEK DPLKRFLYVM KWYLAGWHIA 120
121 PKAVKKPLNP VLGEYFTAYW DLPNKQQAYY ISEQTSHHPP ECAYFYMIPE SSIRVDGVVI 180
181 PKSRFLGNSS AAMMDGSTVL QFLDIKDGNG KPEKYVLTQP NVYVRGILFG KMRIELGDHM 240
241 IIKSPNFQAD IEFKTKGYVF GTYDAIEGTV KDYDGNAYYE ISGKWNDVMY LKDLKQPRSS 300
301 PKVFLDTHKE SPLRPKVRPL SEQGEYESRK LWKKVTDALA VRNHPVATEE KFQIEDHQRQ 360
361 LAKKRIEDGV EFHPKLFRRS KPGEDLDYCI YKNIPVDEDP EKQIRSILQI APILPGQQFT 420
421 DKFFIPAFEK IKSQKKMIEN EKQNPAKQ
|
| Detection Method: |  |
| Confidence: | 240.853872 |
| Match: | PF01237 |
| Description: | Oxysterol-binding protein |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| oxysterol binding | 5.03243665769579 | bayes_pls_golite062009 |
| sterol binding | 4.18891468109664 | bayes_pls_golite062009 |
| 3.02967613614595 | bayes_pls_golite062009 | |
| steroid binding | 2.54679035876403 | bayes_pls_golite062009 |
| phosphoinositide binding | 2.2725849852584 | bayes_pls_golite062009 |
| phospholipid binding | 2.08170907241909 | bayes_pls_golite062009 |
| binding | 1.90982981425351 | bayes_pls_golite062009 |
| cholesterol binding | 1.74311885098566 | bayes_pls_golite062009 |
| phosphatidylinositol-4,5-bisphosphate binding | 1.72950454023501 | bayes_pls_golite062009 |
| lipid binding | 1.52883493550389 | bayes_pls_golite062009 |
