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View Structure Prediction Details

Protein: YKL225W
Organism: Saccharomyces cerevisiae
Length: 115 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKL225W.

Description E-value Query
Range
Subject
Range
YFG3_YEAST - Putative UPF0320 protein YFL063W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YFL063W...
YFL063W - [DUBIOUS] Dubious open reading frame, based on available experimental and comparative sequence data
158.0 [0..1] [115..28]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRIYHSQLT LLSHSTPWPS LTKSVRCTHI IIHGTCLSGL YPVQFTHKTH DYPHFNIYIS  60
   61 FSGSKYCITA LNAYIIPLLL HILTIQFIHT YFNIPTKSPL KLPKHKNILL FNNNT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 57.387216
Match: PF04318.3
Description: No description for PF04318.3 was found.

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle