| Protein: | MCH2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 473 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCH2.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-63 | [1..473] | [1..473] |
|
|
8.0E-61 | [30..472] | [8..481] |
|
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1.0E-60 | [30..472] | [8..481] |
|
|
8.0E-59 | [30..472] | [8..480] |
|
|
2.0E-57 | [37..464] | [20..482] |
|
|
3.0E-57 | [37..464] | [20..482] |
|
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3.0E-57 | [21..466] | [7..484] |
|
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3.0E-57 | [21..466] | [7..484] |
|
|
4.0E-57 | [30..470] | [8..477] |
|
|
6.0E-57 | [30..470] | [8..477] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MSEERHEDHH RDVENKLNLN GKDDINGNTS ISIEVPDGGY GWFILLAFIL YNFSTWGANS 60
61 GYAIYLAHYL ENNTFA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.459 | a.74.1 | Cyclin-like |
| View | Download | 0.416 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.355 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.422 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.397 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.348 | d.58.17 | Metal-binding domain |
| View | Download | 0.346 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.339 | a.39.1 | EF-hand |
| View | Download | 0.332 | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.331 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.329 | d.58.17 | Metal-binding domain |
| View | Download | 0.322 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.315 | d.58.10 | Acylphosphatase-like |
| View | Download | 0.294 | d.58.49 | YajQ-like |
| View | Download | 0.293 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.291 | a.39.1 | EF-hand |
| View | Download | 0.289 | d.58.12 | eEF-1beta-like |
| View | Download | 0.288 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.285 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.282 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.281 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.277 | a.64.1 | Saposin |
| View | Download | 0.276 | d.58.17 | Metal-binding domain |
| View | Download | 0.276 | a.4.7 | Ribosomal protein L11, C-terminal domain |
| View | Download | 0.268 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.249 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.247 | a.74.1 | Cyclin-like |
| View | Download | 0.244 | a.112.1 | Description not found. |
| View | Download | 0.243 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.241 | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.225 | a.47.2 | t-snare proteins |
| View | Download | 0.223 | a.77.1 | DEATH domain |
| View | Download | 0.221 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.219 | a.39.1 | EF-hand |
| View | Download | 0.218 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.216 | d.186.1 | Head-to-tail joining protein W, gpW |
| View | Download | 0.212 | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.206 | d.80.1 | Tautomerase/MIF |
| View | Download | 0.202 | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.201 | d.58.7 | RNA-binding domain, RBD |
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.3426261924492 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.29689809004391 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.94035843948137 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.5181741634556 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| binding | 0.805286077372817 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [77-473] |
1 11 21 31 41 51
| | | | | |
1 GGSKLDYASI GGLAFSCGLF FAPVITWLYH IFSIQFIIGL GILFQGAALL LAAFSVTLWE 60
61 IYLTQGVLIG FGLAFIFIPS VTLIPLWFRN KRSLASGIGT AGSGLGGIVF NLGMQSILQK 120
121 RGVKWALIAQ CIICTSLSTI ALMLTRTTHQ GLRQHKRSYK FELLDYDVLS NFAVWLLFGF 180
181 VSFAMLGYVV LLYSLSDFTV SLGYTSKQGS YVSCMVSVGS LLGRPIVGHI ADKYGSLTVG 240
241 MILHLVMAIL CWAMWIPCKN LATAIRFGLL VGSIMGTIWP TIASIVTRIV GLQKLPGTFG 300
301 STWIFMAAFA LVAPIIGLEL RSTDTNGNDY YRTAIFVGFA YFGVSLCQWL LRGFIIARDE 360
361 IAVREAYSAD QNELHLNVKL SHMSKCLFRY KQLPRRV
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| Detection Method: | |
| Confidence: | 13.30103 |
| Match: | 1ja5A_ |
| Description: | No description for 1ja5A_ was found. |
