Protein: | LST4 |
Organism: | Saccharomyces cerevisiae |
Length: | 828 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LST4.
Description | E-value | Query Range |
Subject Range |
|
652.0 | [0..1] | [306..1] |
|
444.0 | [0..72] | [824..8] |
|
375.0 | [0..60] | [802..28] |
|
361.0 | [0..74] | [803..35] |
|
58.0 | [0..147] | [505..173] |
|
49.0 | [0..503] | [733..750] |
Region A: Residues: [1-322] |
1 11 21 31 41 51 | | | | | | 1 MLGNLLRNKT SSSGFEKSSE HSDFSSVVPN VPVYCKAAST GTTKTAAGAL LDTAVNVEKP 60 61 SEMLSTTSPP ILDHISDDLK LKLFGSRDIP YSRPIDTLQN NGGLGTDKIT SINEKTYAFR 120 121 ILIIEEAGQM ACRNNYRDIF DYTTSKISNS MEQIRPSELK EYIFGSPVRS SDLTQCDKIR 180 181 TIPNSDLVLI TRIFYYTHQY NRIAISLCIP RILLPVVAES WSSISSWLTQ TQKMLIGFLT 240 241 KNRIMQENTG NYSNNSVIKL SNIDIRTHYP KEIEIMVQTL QKRVIPGLRS MSEIPRLFLY 300 301 PETFKEFVHV WFKSIFNWIE IK |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [323-513] |
1 11 21 31 41 51 | | | | | | 1 DGPKLGFLPL LMAMIISDYR HTIRELKTSK IVILSGNMVV ANKLLFILSA LLEPKYKGQI 60 61 TIRRENIRSD SSAVSRNKSN NNFVDKPETE LSTLTSTDNL LSRTENNSNH NYNNSNVSSN 120 121 SIGSPNFHSL RKGWQIPNRR NSNTSVSVSS SESLAEVIQP SSFKSGSSSL HYLSSSISSQ 180 181 PGSYGSWFNK R |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.427 | c.116.1 | alpha/beta knot |
View | Download | 0.421 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
View | Download | 0.367 | c.66.1 | S-adenosyl-L-methionine-dependent methyltransferases |
View | Download | 0.341 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
View | Download | 0.341 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
View | Download | 0.313 | c.1.11 | Enolase C-terminal domain-like |
View | Download | 0.260 | c.116.1 | alpha/beta knot |
View | Download | 0.205 | c.115.1 | Hypothetical protein MTH777 (MT0777) |
Region A: Residues: [514-828] |
1 11 21 31 41 51 | | | | | | 1 PTISQFFQPS PSLKHNESWE RLQTTAGNMQ RTSSSSSLQQ ATSRLSLTTP QQSPSISEYD 60 61 EYPWMGTPGS PNVGDVSHAP PLVKNISYKF PLKNVELKRD CQRISQDDLL DEAFERICQP 120 121 SLADLNSTYE IFPGNSSYAD ILTTDSDIDD GLMNKPLELL PKYTMYLTHF NNFFQLQACP 180 181 AGQESESRIT NSMKIDLLKA DYTRSLLVSL RSRDIRDVAL KREFTGNNNN NSNQNIYDEN 240 241 FVGKRKYVLK QKTRKIFSCG KIGKLSTSLE NCVNFVENSI KSAMMLYDDN GIDSELRDSE 300 301 ALRIFSSLVH YCNAG |