| Protein: | LST4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 828 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LST4.
| Description | E-value | Query Range |
Subject Range |
|
|
652.0 | [0..1] | [306..1] |
|
|
444.0 | [0..72] | [824..8] |
|
|
375.0 | [0..60] | [802..28] |
|
|
361.0 | [0..74] | [803..35] |
|
|
58.0 | [0..147] | [505..173] |
|
|
49.0 | [0..503] | [733..750] |
|
Region A: Residues: [1-322] |
1 11 21 31 41 51
| | | | | |
1 MLGNLLRNKT SSSGFEKSSE HSDFSSVVPN VPVYCKAAST GTTKTAAGAL LDTAVNVEKP 60
61 SEMLSTTSPP ILDHISDDLK LKLFGSRDIP YSRPIDTLQN NGGLGTDKIT SINEKTYAFR 120
121 ILIIEEAGQM ACRNNYRDIF DYTTSKISNS MEQIRPSELK EYIFGSPVRS SDLTQCDKIR 180
181 TIPNSDLVLI TRIFYYTHQY NRIAISLCIP RILLPVVAES WSSISSWLTQ TQKMLIGFLT 240
241 KNRIMQENTG NYSNNSVIKL SNIDIRTHYP KEIEIMVQTL QKRVIPGLRS MSEIPRLFLY 300
301 PETFKEFVHV WFKSIFNWIE IK
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [323-513] |
1 11 21 31 41 51
| | | | | |
1 DGPKLGFLPL LMAMIISDYR HTIRELKTSK IVILSGNMVV ANKLLFILSA LLEPKYKGQI 60
61 TIRRENIRSD SSAVSRNKSN NNFVDKPETE LSTLTSTDNL LSRTENNSNH NYNNSNVSSN 120
121 SIGSPNFHSL RKGWQIPNRR NSNTSVSVSS SESLAEVIQP SSFKSGSSSL HYLSSSISSQ 180
181 PGSYGSWFNK R
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.427 | c.116.1 | alpha/beta knot |
| View | Download | 0.421 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.367 | c.66.1 | S-adenosyl-L-methionine-dependent methyltransferases |
| View | Download | 0.341 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.341 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.313 | c.1.11 | Enolase C-terminal domain-like |
| View | Download | 0.260 | c.116.1 | alpha/beta knot |
| View | Download | 0.205 | c.115.1 | Hypothetical protein MTH777 (MT0777) |
|
Region A: Residues: [514-828] |
1 11 21 31 41 51
| | | | | |
1 PTISQFFQPS PSLKHNESWE RLQTTAGNMQ RTSSSSSLQQ ATSRLSLTTP QQSPSISEYD 60
61 EYPWMGTPGS PNVGDVSHAP PLVKNISYKF PLKNVELKRD CQRISQDDLL DEAFERICQP 120
121 SLADLNSTYE IFPGNSSYAD ILTTDSDIDD GLMNKPLELL PKYTMYLTHF NNFFQLQACP 180
181 AGQESESRIT NSMKIDLLKA DYTRSLLVSL RSRDIRDVAL KREFTGNNNN NSNQNIYDEN 240
241 FVGKRKYVLK QKTRKIFSCG KIGKLSTSLE NCVNFVENSI KSAMMLYDDN GIDSELRDSE 300
301 ALRIFSSLVH YCNAG
|
| Detection Method: | |
| Confidence: | 7.03 |
| Match: | |
| Description: | No description for 1f1kA was found. |
