| Protein: | KKQ8 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 734 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KKQ8.
| Description | E-value | Query Range |
Subject Range |
|
|
755.0 | [0..11] | [734..1] |
|
|
444.0 | [0..351] | [733..6] |
|
|
441.0 | [0..289] | [733..28] |
|
|
437.0 | [0..309] | [733..8] |
|
|
437.0 | [0..194] | [725..3] |
|
Region A: Residues: [1-223] |
1 11 21 31 41 51
| | | | | |
1 MMDSKTLTAS MVMQEEKKRQ QPVTRRVRSF SESFKNLFRP PRSRDSSPIN VTRIPYRSSS 60
61 TSPKRSSEPP RRSTVSAQIL DPKNSPIRQR SYTLKCCTPG LSHPFRQTGS GASNSPTRHR 120
121 SISGEEQEIV NSLPEYKRSA SHTFHGIRRP RSRSSSVSSC DSSNGTTSSS DSQWAMDSLL 180
181 DDSDNDLTPY RGSNKDILKS KDRAPYNYID DYNKKALRRA TSY
|
| Detection Method: |  |
| Confidence: | 8.91 |
| Match: | |
| Description: | No description for 1ldvA was found. |
|
Region A: Residues: [224-369] |
1 11 21 31 41 51
| | | | | |
1 PNPLPSKQFY NERLYTRRSH PDEESLESLP RFAGADVQCI IEQNGFKVYE DGSHEHNIKL 60
61 SGVIAKLEKG NSLPAHRQGS LSRPRLGITL SGLFKHHKNE CDIENALSLL PNVEKSQTNH 120
121 EKRTGQSPND SNRSSPTQGR EDYLKI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.694 | a.118.8 | TPR-like |
| View | Download | 0.595 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.586 | a.29.2 | Bromodomain |
| View | Download | 0.586 | a.29.2 | Bromodomain |
| View | Download | 0.564 | a.25.1 | Ferritin-like |
| View | Download | 0.469 | d.110.2 | GAF domain-like |
| View | Download | 0.445 | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.398 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
|
Region A: Residues: [370-528] |
1 11 21 31 41 51
| | | | | |
1 VNPDASLGSD ELKLINSLSS RIHKSLQNYL QEKNLKPAEC IGEQAPTFQD NYGHPVGLVG 60
61 AGAYGEVKLC ARLRNEKDSP PFETYHDSKY IYYAVKELKP KPDSDLEKFC TKITSEFIIG 120
121 HSLSHYHKNG KKPAPNILNV FDILEDSSSF IEVMEFCPA
|
| Detection Method: | |
| Confidence: | 260.035458 |
| Match: | 1a06A |
| Description: | CALMODULIN-DEPENDENT PROTEIN KINASE FROM RAT |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [529-734] |
1 11 21 31 41 51
| | | | | |
1 GDLYGMLVGK SKLKGRLHPL EADCFMKQLL HGVKFMHDHG IAHCDLKPEN ILFYPHGLLK 60
61 ICDFGTSSVF QTAWERRVHA QKGIIGSEPY VAPEEFVDGE YYDPRLIDCW SCGVVYITMI 120
121 LGHYLWKVAS REKDMSYDEF YKEMQRKNQF RVFEELKHVN SELATNRKIA LYRIFQWEPR 180
181 KRISVGKLLD MQWMKSTNCC LIYDST
|
| Detection Method: | |
| Confidence: | 260.035458 |
| Match: | 1a06A |
| Description: | CALMODULIN-DEPENDENT PROTEIN KINASE FROM RAT |
| Matching Structure (courtesy of the PDB): |
|
