| Protein: | SSH4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 579 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SSH4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..579] | [1..579] |
|
|
4.0E-66 | [70..414] | [150..499] |
|
|
9.0E-63 | [185..452] | [628..904] |
|
|
3.0E-60 | [185..452] | [623..899] |
|
|
3.0E-60 | [185..452] | [623..899] |
|
|
4.0E-59 | [185..452] | [623..899] |
|
|
4.0E-59 | [185..452] | [623..899] |
|
Region A: Residues: [1-184] |
1 11 21 31 41 51
| | | | | |
1 MYVTFNEALD SSFGNLESPN HDFKVGDPNM VPTPPMDSDS AAISLAFLIS LSITFAILML 60
61 ILVVIAAYVT FCGDDESEYD EENALGTRTS GTLHSLFGKK HSGILLDSSF ASPGGFDDEI 120
121 VLQERELEEL PKMSAYEVEL YIRAKEFQMM SPPMVKDFGT YLDSDDQQFI KDRGIQSYFL 180
181 LPSI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [185-421] |
1 11 21 31 41 51
| | | | | |
1 NDNIDEYGNF LPSFIVQDKL DIQFSKFNKS SSTVMNYPLP HNRKDAVYFE VKIFRHIQKS 60
61 NSIFSIGLTT VPYPYFRVPG MAKYSIAYES TGKLRINNPF TASTLLPKLE EGDTVGFGYR 120
121 YKTGTIFITH NGKKLMDVTQ NIGIDLFIGI GAFNAAYTRT YTRDGLLEDP DNVSFREALS 180
181 EGKDIEVAKD LQRVHDPHDE SDEMTSDEVE LHVNLGQVGF VFIEANVKKY AFGSVYG
|
| Detection Method: | |
| Confidence: | 21.744727 |
| Match: | PF00622 |
| Description: | SPRY domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| hydrolase activity | 1.4534000838308 | bayes_pls_golite062009 |
| binding | 1.37879632043452 | bayes_pls_golite062009 |
| protein binding | 1.15590148654655 | bayes_pls_golite062009 |
| sugar binding | 1.14331447813206 | bayes_pls_golite062009 |
| transporter activity | 0.0373253642688324 | bayes_pls_golite062009 |
|
Region A: Residues: [422-579] |
1 11 21 31 41 51
| | | | | |
1 QIGIPPAYNG TEIKKDTILQ KGEELPPRYA DTDNFFGSMK VKEGSSSRIT AQTSKPLWSV 60
61 GTYERISSNF DRENNVYHDS LETDDNNTDN NVNNNDENAG CNENSPLLED DGNKRPENSN 120
121 TPREVSDGAI NKNPRNKSTK KRQRNRGKSS KKKNRSRK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
