| Protein: | HSL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1518 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HSL1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1518] | [1..1518] |
|
|
0.0 | [23..732] | [3..675] |
|
|
0.0 | [22..570] | [1..512] |
|
|
0.0 | [29..571] | [21..520] |
|
|
0.0 | [43..570] | [35..519] |
|
|
0.0 | [30..570] | [37..540] |
|
Region A: Residues: [1-198] |
1 11 21 31 41 51
| | | | | |
1 MTGHVSKTSH VPKGRPSSLA KKAAKRAMAK VNSNPKRASG HLERVVQSVN DATKRLSQPD 60
61 STVSVATKSS KRKSRDTVGP WKLGKTLGKG SSGRVRLAKN METGQLAAIK IVPKKKAFVH 120
121 CSNNGTVPNS YSSSMVTSNV SSPSIASREH SNHSQTNPYG IEREIVIMKL ISHTNVMALF 180
181 EVWENKSELY LVLEYVDG
|
|
Region B: Residues: [392-408] |
1 11 21 31 41 51
| | | | | |
1 GKSNSDLHLL NNVSPSI
|
| Detection Method: |  |
| Confidence: | 579.0103 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [199-391] |
1 11 21 31 41 51
| | | | | |
1 GELFDYLVSK GKLPEREAIH YFKQIVEGVS YCHSFNICHR DLKPENLLLD KKNRRIKIAD 60
61 FGMAALELPN KLLKTSCGSP HYASPEIVMG RPYHGGPSDV WSCGIVLFAL LTGHLPFNDD 120
121 NIKKLLLKVQ SGKYQMPSNL SSEARDLISK ILVIDPEKRI TTQEILKHPL IKKYDDLPVN 180
181 KVLRKMRKDN MAR
|
| Detection Method: | |
| Confidence: | 579.0103 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [409-500] |
1 11 21 31 41 51
| | | | | |
1 VTLHSKGEID ESILRSLQIL WHGVSRELIT AKLLQKPMSE EKLFYSLLLQ YKQRHSISLS 60
61 SSSENKKSAT ESSVNEPRIE YASKTANNTG LR
|
| Detection Method: | |
| Confidence: | 11.0 |
| Match: | 1ahr__ |
| Description: | Calmodulin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [501-577] |
1 11 21 31 41 51
| | | | | |
1 SENNDVKTLH SLEIHSEDTS TVNQNNAITG VNTEINAPVL AQKSQFSINT LSQPESDKAE 60
61 AEAVTLPPAI PIFNASS
|
| Detection Method: | |
| Confidence: | 11.0 |
| Match: | 1ahr__ |
| Description: | Calmodulin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [578-671] |
1 11 21 31 41 51
| | | | | |
1 SRIFRNSYTS ISSRSRRSLR LSNSRLSLSA STSRETVHDN EMPLPQLPKS PSRYSLSRRA 60
61 IHASPSTKSI HKSLSRKNIA ATVAARRTLQ NSAS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.476 | a.3.1 | Cytochrome c |
| View | Download | 0.380 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.525 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.449 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.388 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.344 | a.39.1 | EF-hand |
| View | Download | 0.327 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.285 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.282 | d.131.1 | DNA clamp |
| View | Download | 0.278 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.278 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.269 | b.55.1 | PH domain-like |
| View | Download | 0.265 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.248 | a.118.1 | ARM repeat |
| View | Download | 0.248 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.241 | c.47.1 | Thioredoxin-like |
| View | Download | 0.238 | g.41.6 | Hypothetical protein MTH1184 |
| View | Download | 0.228 | a.11.2 | Second domain of FERM |
| View | Download | 0.224 | b.55.1 | PH domain-like |
| View | Download | 0.221 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.211 | d.131.1 | DNA clamp |
| View | Download | 0.207 | b.55.1 | PH domain-like |
| View | Download | 0.203 | d.131.1 | DNA clamp |
|
Region A: Residues: [672-821] |
1 11 21 31 41 51
| | | | | |
1 KRSLYSLQSI SKRSLNLNDL LVFDDPLPSK KPASENVNKS EPHSLESDSD FEILCDQILF 60
61 GNALDRILEE EEDNEKERDT QRQRQNDTKS SADTFTISGV STNKENEGPE YPTKIEKNQF 120
121 NMSYKPSENM SGLSSFPIFE KENTLSSSYL
|
| Detection Method: | |
| Confidence: | 9.74 |
| Match: | 1k83A |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [822-997] |
1 11 21 31 41 51
| | | | | |
1 EEQKPKRAAL SDITNSFNKM NKQEGMRIEK KIQREQLQKK NDRPSPLKPI QHQELRVNSL 60
61 PNDQGKPSLS LDPRRNISQP VNSKVESLLQ GLKFKKEPAS HWTHERGSLF MSEHVEDEKP 120
121 VKASDVSIES SYVPLTTVAT SSRDPSVLAE SSTIQKPMLS LPSSFLNTSM TFKNLS
|
| Detection Method: | |
| Confidence: | 10.41 |
| Match: | 1ivoA |
| Description: | EGF receptor extracellular domain; EGF receptor Cys-rich domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [998-1355] |
1 11 21 31 41 51
| | | | | |
1 QILADDGDDK HLSVPQNQSR SVAMSHPLRK QSAKISLTPR SNLNANLSVK RNQGSPGSYL 60
61 SNDLDGISDM TFAMEIPTNT FTAQAIQLMN NDTDNNKINT SPKASSFTKE KVIKSAAYIS 120
121 KEKEPDNSDT NYIPDYTIPN TYDEKAINIF EDAPSDEGSL NTSSSESDSR ASVHRKAVSI 180
181 DTMATTNVLT PATNVRVSLY WNNNSSGIPR ETTEEILSKL RLSPENPSNT HMQKRFSSTR 240
241 GSRDSNALGI SQSLQSMFKD LEEDQDGHTS QADILESSMS YSKRRPSEES VNPKQRVTML 300
301 FDEEEEESKK VGGGKIKEEH TKLDNKISEE SSQLVLPVVE KKENANNTEN NYSKIPKP
|
| Detection Method: | |
| Confidence: | 10.41 |
| Match: | 1ivoA |
| Description: | EGF receptor extracellular domain; EGF receptor Cys-rich domains |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1356-1518] |
1 11 21 31 41 51
| | | | | |
1 STIKVTKDTA MESNTQTHTK KPILKSVQNV EVEEAPSSDK KNWFVKLFQN FSSHNNATKA 60
61 SKNHVTNISF DDAHMLTLNE FNKNSIDYQL KNLDHKFGRK VVEYDCKFVK GNFKFKIKIT 120
121 STPNASSVIT VKKRSKHSNT SSNKAFEKFN DDVERVIRNA GRS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1354-1518] |
1 11 21 31 41 51
| | | | | |
1 KPSTIKVTKD TAMESNTQTH TKKPILKSVQ NVEVEEAPSS DKKNWFVKLF QNFSSHNNAT 60
61 KASKNHVTNI SFDDAHMLTL NEFNKNSIDY QLKNLDHKFG RKVVEYDCKF VKGNFKFKIK 120
121 ITSTPNASSV ITVKKRSKHS NTSSNKAFEK FNDDVERVIR NAGRS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
