Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJR142W.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [1..342] | [1..342] |
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2.0E-65 | [28..339] | [16..305] |
|
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6.0E-65 | [17..335] | [74..371] |
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1.0E-57 | [51..336] | [25..296] |
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5.0E-54 | [83..323] | [45..295] |
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2.0E-53 | [90..323] | [40..276] |
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1.0E-50 | [64..317] | [5..271] |
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9.0E-50 | [64..317] | [5..283] |
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1.0E-49 | [79..323] | [10..249] |
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1.0E-49 | [116..323] | [34..248] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MKVEKSSKGL EVLVRTQEDD LEGFSFLEIM DRVDPLPLDF ENYKNFKEGI YYMCTHDGTK 60
61 IGFVLKFAIN EMETVCSEIF EETFQLDESR HELRFKSEDF DHRNNLIDQL ARKMYLESSL 120
121 S
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.757 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.757 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.738 | d.185.1 | LuxS/MPP-like metallohydrolase |
| View | Download | 0.738 | d.185.1 | LuxS/MPP-like metallohydrolase |
| View | Download | 0.676 | a.1.1 | Globin-like |
| View | Download | 0.676 | a.1.1 | Globin-like |
| View | Download | 0.640 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.640 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.628 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.628 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.580 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.531 | a.47.2 | t-snare proteins |
| View | Download | 0.520 | a.19.1 | Fertilization protein |
| View | Download | 0.482 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.443 | a.83.1 | Guanido kinase N-terminal domain |
| View | Download | 0.431 | d.212.1 | TolA/TonB C-terminal domain |
| View | Download | 0.424 | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.419 | a.24.4 | Hemerythrin |
| View | Download | 0.414 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.414 | a.1.1 | Globin-like |
| View | Download | 0.399 | a.118.8 | TPR-like |
| View | Download | 0.387 | a.7.8 | GAT domain |
| View | Download | 0.386 | d.93.1 | SH2 domain |
| View | Download | 0.384 | a.24.3 | Cytochromes |
| View | Download | 0.362 | d.110.4 | SNARE-like |
| View | Download | 0.357 | d.55.1 | Ribosomal protein L22 |
| View | Download | 0.352 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.346 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.344 | a.63.1 | Apolipophorin-III |
| View | Download | 0.337 | a.74.1 | Cyclin-like |
| View | Download | 0.334 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.326 | a.118.18 | Cysteine rich protein B (HcpB) |
| View | Download | 0.325 | a.77.1 | DEATH domain |
| View | Download | 0.324 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.323 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.321 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.317 | a.25.1 | Ferritin-like |
| View | Download | 0.316 | d.110.4 | SNARE-like |
| View | Download | 0.307 | a.7.1 | Spectrin repeat |
| View | Download | 0.302 | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.299 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.291 | d.110.4 | SNARE-like |
| View | Download | 0.286 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.281 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.279 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.276 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.273 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.272 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.271 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.268 | d.6.1 | Prion-like |
| View | Download | 0.268 | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.255 | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.250 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.248 | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.246 | c.114.1 | YchN-like |
| View | Download | 0.245 | d.208.1 | MTH1598-like |
| View | Download | 0.241 | d.224.1 | SufE-like |
| View | Download | 0.241 | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.236 | a.7.1 | Spectrin repeat |
| View | Download | 0.236 | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.235 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.230 | a.1.1 | Globin-like |
| View | Download | 0.230 | a.64.1 | Saposin |
| View | Download | 0.230 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.229 | d.95.2 | Homing endonucleases |
| View | Download | 0.217 | a.118.10 | Phosphoinositide-binding clathrin adaptor, N-terminal domain |
| View | Download | 0.212 | a.47.2 | t-snare proteins |
| View | Download | 0.210 | d.65.1 | Hedgehog/DD-pepidase |
| View | Download | 0.207 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.204 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.203 | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.201 | a.40.2 | X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain |
| View | Download | 0.200 | f.18.1 | F1F0 ATP synthase subunit A |
|
Region A: Residues: [122-342] |
1 11 21 31 41 51
| | | | | |
1 GVKGWRNEKY AVWVNKKPYV LVERAVAGVL GIITYGIHIN GYVLDPKSKK VQFWVPRRSK 60
61 TKQTWPLMLD NIIAGGLGYP YGIYETVLKE SMEEANLEKS VIEDNIKATG SVSYLYFTGD 120
121 ISVTKFNKES DFIVGEVQYV YDLKLSEDII PKPNDGEVES FNLFSLQETI NALRKKEFKP 180
181 NCALVMVDFL IRHGYITPEN EPNYLELVTR MHRRLPFPTL N
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| Detection Method: | |
| Confidence: | 33.0 |
| Match: | 1hztA_ |
| Description: | Isopentenyl diphosphate isomerase |
Matching Structure (courtesy of the PDB): |
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