| Protein: | CDC11 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 415 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC11.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..415] | [26..420] |
|
|
0.0 | [1..415] | [26..420] |
|
|
0.0 | [7..384] | [129..478] |
|
|
0.0 | [1..387] | [119..484] |
|
|
0.0 | [1..411] | [9..400] |
|
Region A: Residues: [1-175] |
1 11 21 31 41 51
| | | | | |
1 MSGIIDASSA LRKRKHLKRG ITFTVMIVGQ SGSGRSTFIN TLCGQQVVDT STTILLPTDT 60
61 STEIDLQLRE ETVELEDDEG VKIQLNIIDT PGFGDSLDNS PSFEIISDYI RHQYDEILLE 120
121 ESRVRRNPRF KDGRVHCCLY LINPTGHGLK EIDVEFIRQL GSLVNIIPVI SKSDS
|
| Detection Method: |  |
| Confidence: | 7.09691 |
| Match: | 1egaA_ |
| Description: | GTPase Era, N-terminal domain; GTPase Era C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [176-415] |
1 11 21 31 41 51
| | | | | |
1 LTRDELKLNK KLIMEDIDRW NLPIYNFPFD EDEISDEDYE TNMYLRTLLP FAIIGSNEVY 60
61 EMGGDVGTIR GRKYPWGILD VEDSSISDFV ILRNALLISH LHDLKNYTHE ILYERYRTEA 120
121 LSGESVAAES IRPNLTKLNG SSSSSTTTRR NTNPFKQSNN INNDVLNPAS DMHGQSTGEN 180
181 NETYMTREEQ IRLEEERLKA FEERVQQELL LKRQELLQRE KELREIEARL EKEAKIKQEE 240
241
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
