| Protein: | RAD7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 565 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RAD7.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-77 | [42..565] | [484..1001] |
|
|
2.0E-70 | [25..563] | [78..613] |
|
Region A: Residues: [1-55] |
1 11 21 31 41 51
| | | | | |
1 MYRSRNRPKR GGENEVKGPN SALTQFLREE GISAENIKQK WYQRQSKKQE DATDE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.220 | a.4.1 | Homeodomain-like |
| View | Download | 0.300 | a.5.2 | UBA-like |
| View | Download | 0.368 | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.293 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.368 | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.300 | a.5.2 | UBA-like |
| View | Download | 0.298 | a.5.2 | UBA-like |
| View | Download | 0.293 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.270 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.269 | g.16.1 | Trefoil |
| View | Download | 0.214 | a.4.1 | Homeodomain-like |
| View | Download | 0.211 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.202 | a.4.1 | Homeodomain-like |
|
Region A: Residues: [56-216] |
1 11 21 31 41 51
| | | | | |
1 KKGKAEDDSF TAEISRVVED EEIDEIGTGS GTETERAQVS YDARMKLVPA DSDEEEYETS 60
61 HISDTPVSLS SANDRESLTK KRQNTAKIIQ NRRRKRKRAA DLLDRRVNKV SSLQSLCITK 120
121 ISENISKWQK EADESSKLVF NKLRDVLGGV STANLNNLAK A
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 2bnh__ |
| Description: | Ribonuclease inhibitor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [217-271] |
1 11 21 31 41 51
| | | | | |
1 LSKNRALNDH TLQLFLKTDL KRLTFSDCSK ISFDGYKTLA IFSPHLTELS LQMCG
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 2bnh__ |
| Description: | Ribonuclease inhibitor |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [272-324] |
1 11 21 31 41 51
| | | | | |
1 QLNHESLLYI AEKLPNLKSL NLDGPFLINE DTWEKFFVIM KGRLEEFHIS NTH
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 2bnh__ |
| Description: | Ribonuclease inhibitor |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [325-450] |
1 11 21 31 41 51
| | | | | |
1 RFTDKSLSNL LINCGSTLVS LGLSRLDSIS NYALLPQYLV NDEFHSLCIE YPFNEEDVND 60
61 EIIINLLGQI GRTLRKLVLN GCIDLTDSMI INGLTAFIPE KCPLEVLSLE ESDQITTDSL 120
121 SYFFSK
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 2bnh__ |
| Description: | Ribonuclease inhibitor |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [451-565] |
1 11 21 31 41 51
| | | | | |
1 VELNNLIECS FRRCLQLGDM AIIELLLNGA RDSLRSLNLN SLKELTKEAF VALACPNLTY 60
61 LDLGFVRCVD DSVIQMLGEQ NPNLTVIDVF GDNLVTEKAT MRPGLTLIGR QSDSI
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 2bnh__ |
| Description: | Ribonuclease inhibitor |
| Matching Structure (courtesy of the PDB): |
|
