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View Structure Prediction Details

Protein: POL32
Organism: Saccharomyces cerevisiae
Length: 350 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POL32.

Description E-value Query
Range
Subject
Range
DPOD3_YEAST - DNA polymerase delta subunit 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=POL32 PE=...
POL32 - Third subunit of DNA polymerase delta, involved in chromosomal DNA replication; required for error-p...
0.0 [1..350] [1..350]
gi|3411015 - gi|3411015|gb|AAC31120.1| atrophin-1 related protein [Homo sapiens]
0.001 [139..333] [38..229]
gi|3236351 - gi|3236351|gb|AAC32042.1| PRP4 protein kinase homolog [Mus musculus]
0.006 [125..338] [7..194]
thoc-2 - status:Partially_confirmed UniProt:Q18033 protein_id:AAB47593.3
0.009 [118..251] [1265..1406]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQKASYFIN EKLFTEVKPV LFTDLIHHLK IGPSMAKKLM FDYYKQTTNA KYNCVVICCY  60
   61 KDQTIKIIHD LSNI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQQDSIIDCF IYAFNPMDSF IPYYDIIDQK DCLTIKNSYE LKVSESSKII ERTKTLEEKS  60
   61 KPLVRPTARS KTTPEETTGR KSKSKDMGLR STALLAKMKK DRDDKETSRQ NELRKRKEEN 120
  121 LQKINKQNPE REAQMKELNN LFVEDDLDTE EVNGGSKPNS PKETDSNDKD KNNDDLEDLL 180
  181 ETTAEDSLMD VPKIQQTKPS ETEHSKEPKS EEEPSSFIDE DGYIVTKRPA TSTPPRKPSP 240
  241 VVKRALSSSK KQETPSSNKR LKKQGTLESF FKRKAK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle