| Protein: | POL32 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 350 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POL32.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..350] | [1..350] |
|
|
0.001 | [139..333] | [38..229] |
|
|
0.006 | [125..338] | [7..194] |
|
|
0.009 | [118..251] | [1265..1406] |
|
Region A: Residues: [1-74] |
1 11 21 31 41 51
| | | | | |
1 MDQKASYFIN EKLFTEVKPV LFTDLIHHLK IGPSMAKKLM FDYYKQTTNA KYNCVVICCY 60
61 KDQTIKIIHD LSNI
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.634 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.593 | a.101.1 | Uteroglobin-like |
| View | Download | 0.598 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.663 | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.663 | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.648 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.634 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.598 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.593 | a.112.1 | Description not found. |
| View | Download | 0.593 | a.112.1 | Description not found. |
| View | Download | 0.557 | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
| View | Download | 0.531 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.475 | a.126.1 | Serum albumin-like |
| View | Download | 0.469 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.461 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.394 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.393 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.391 | a.64.1 | Saposin |
| View | Download | 0.390 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.388 | d.15.1 | Ubiquitin-like |
| View | Download | 0.383 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.382 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.381 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.368 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.365 | c.52.2 | tRNA splicing endonuclease, C-terminal domain |
| View | Download | 0.364 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.350 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.324 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.323 | a.21.1 | HMG-box |
| View | Download | 0.322 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.320 | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.319 | a.39.1 | EF-hand |
| View | Download | 0.307 | a.3.1 | Cytochrome c |
| View | Download | 0.306 | d.131.1 | DNA clamp |
| View | Download | 0.300 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.294 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.290 | d.29.1 | Ribosomal protein L31e |
| View | Download | 0.290 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.287 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.284 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.276 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.269 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.267 | d.68.3 | SirA-like |
| View | Download | 0.264 | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.261 | a.21.1 | HMG-box |
| View | Download | 0.259 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.258 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.258 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.255 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.253 | d.58.35 | Pseudouridine synthase |
| View | Download | 0.253 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.249 | d.230.3 | Amyloid beta a4 protein copper binding domain (domain 2) |
| View | Download | 0.245 | a.39.1 | EF-hand |
| View | Download | 0.237 | b.1.18 | E set domains |
| View | Download | 0.236 | a.5.3 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.233 | a.39.1 | EF-hand |
| View | Download | 0.230 | c.95.1 | Thiolase-like |
| View | Download | 0.229 | a.83.1 | Guanido kinase N-terminal domain |
| View | Download | 0.216 | g.3.7 | Scorpion toxin-like |
| View | Download | 0.216 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.211 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.211 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.210 | g.10.1 | Hairpin loop containing domain-like |
| View | Download | 0.208 | d.68.7 | R3H domain |
| View | Download | 0.204 | d.15.1 | Ubiquitin-like |
|
Region A: Residues: [75-350] |
1 11 21 31 41 51
| | | | | |
1 PQQDSIIDCF IYAFNPMDSF IPYYDIIDQK DCLTIKNSYE LKVSESSKII ERTKTLEEKS 60
61 KPLVRPTARS KTTPEETTGR KSKSKDMGLR STALLAKMKK DRDDKETSRQ NELRKRKEEN 120
121 LQKINKQNPE REAQMKELNN LFVEDDLDTE EVNGGSKPNS PKETDSNDKD KNNDDLEDLL 180
181 ETTAEDSLMD VPKIQQTKPS ETEHSKEPKS EEEPSSFIDE DGYIVTKRPA TSTPPRKPSP 240
241 VVKRALSSSK KQETPSSNKR LKKQGTLESF FKRKAK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
