| Protein: | SAG1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 650 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAG1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..650] | [1..650] |
|
|
0.0 | [2..311] | [5..309] |
|
|
4.0E-92 | [2..311] | [5..309] |
|
Region A: Residues: [1-369] |
1 11 21 31 41 51
| | | | | |
1 MFTFLKIILW LFSLALASAI NINDITFSNL EITPLTANKQ PDQGWTATFD FSIADASSIR 60
61 EGDEFTLSMP HVYRIKLLNS SQTATISLAD GTEAFKCYVS QQAAYLYENT TFTCTAQNDL 120
121 SSYNTIDGSI TFSLNFSDGG SSYEYELENA KFFKSGPMLV KLGNQMSDVV NFDPAAFTEN 180
181 VFHSGRSTGY GSFESYHLGM YCPNGYFLGG TEKIDYDSSN NNVDLDCSSV QVYSSNDFND 240
241 WWFPQSYNDT NADVTCFGSN LWITLDEKLY DGEMLWVNAL QSLPANVNTI DHALEFQYTC 300
301 LDTIANTTYA TQFSTTREFI VYQGRNLGTA SAKSSFISTT TTDLTSINTS AYSTGSISTV 360
361 ETGNRTTSE
|
| Detection Method: |  |
| Confidence: | 10.54 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [370-461] |
1 11 21 31 41 51
| | | | | |
1 VISHVVTTST KLSPTATTSL TIAQTSIYST DSNITVGTDI HTTSEVISDV ETISRETAST 60
61 VVAAPTSTTG WTGAMNTYIS QFTSSSFATI NS
|
| Detection Method: | |
| Confidence: | 10.54 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [462-650] |
1 11 21 31 41 51
| | | | | |
1 TPIISSSAVF ETSDASIVNV HTENITNTAA VPSEEPTFVN ATRNSLNSFC SSKQPSSPSS 60
61 YTSSPLVSSL SVSKTLLSTS FTPSVPTSNT YIKTKNTGYF EHTALTTSSV GLNSFSETAV 120
121 SSQGTKIDTF LVSSLIAYPS SASGSQLSGI QQNFTSTSLM ISTYEGKASI FFSAELGSII 180
181 FLLLSYLLF
|
| Detection Method: | |
| Confidence: | 12.88 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
