Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJR003C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..539] | [1..539] |
|
Region A: Residues: [1-53] |
1 11 21 31 41 51
| | | | | |
1 MKEFDESYFF KCLTANRHSI MLRSLHSAAT LSNKRFYSLI SHSNRKNIIK KLL
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|
Region B: Residues: [83-93] |
1 11 21 31 41 51
| | | | | |
1 ESLNKLEVPK K
|
|
Region C: Residues: [205-447] |
1 11 21 31 41 51
| | | | | |
1 SNYNLPSELV EPILIYIVDN GIPNVLGSVL KYKIPLSFFD KYVSEMTQYQ ICELYDFYSL 60
61 DNIVADPLVL HKCLTVLGEN EKIQQTEEEK EIISKLEEEI DIVKSQCHDN WSLEFPNWSV 120
121 RKTATSFEEL FLEIQKRNID KKDFELAHKL LRLIGAFKGK VSLFFKLYDE YLLKFKNNED 180
181 DLMFEAFLTL CCQGYKSSNE KMLQYAEAFI KEDFDSKLES KIQSVLIVAN AKANIDLSLK 240
241 IYN
|
| Detection Method: |  |
| Confidence: | 8.3 |
| Match: | 1n1bA |
| Description: | (+)-bornyl diphosphate synthase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [54-82] |
1 11 21 31 41 51
| | | | | |
1 RHPSFDPIRH HLPEDITTID PYSLSQNVI
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|
Region B: Residues: [94-204] |
1 11 21 31 41 51
| | | | | |
1 DAAMVHNMMI ENLSDLDYGV ATIHSNNLRD LDLKPSLPAI KQIIRNNPGR VQSSWELFTQ 60
61 YKASMENVPD ELMEVVLEKI IKFDKAEKVD GKKSLTYQDL VRCLYLINHF S
|
| Detection Method: | |
| Confidence: | 8.3 |
| Match: | 1n1bA |
| Description: | (+)-bornyl diphosphate synthase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [448-539] |
1 11 21 31 41 51
| | | | | |
1 SNISTAKREK DKYTDLAESD VLTESLILAF LSRDDADFAR VIFDGALGEK LISGPTAAKK 60
61 IKNLLAQYGE ALETKTSKQV MQTKIEHYME SI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.757 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.758 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.743 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.914 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.773 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.702 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.685 | a.46.1 | Methionine synthase domain |
| View | Download | 0.615 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.604 | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.600 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.592 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.569 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.500 | a.64.1 | Saposin |
| View | Download | 0.499 | a.24.4 | Hemerythrin |
| View | Download | 0.492 | a.118.8 | TPR-like |
| View | Download | 0.480 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.476 | a.4.1 | Homeodomain-like |
| View | Download | 0.469 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.468 | a.64.1 | Saposin |
| View | Download | 0.453 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.436 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.430 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.427 | a.64.1 | Saposin |
| View | Download | 0.411 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.411 | a.49.1 | C-terminal domain of B transposition protein |
| View | Download | 0.408 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.405 | a.118.1 | ARM repeat |
| View | Download | 0.394 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.385 | a.118.8 | TPR-like |
| View | Download | 0.381 | a.64.1 | Saposin |
| View | Download | 0.376 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.375 | a.1.1 | Globin-like |
| View | Download | 0.365 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.359 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.358 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.355 | b.34.8 | Fumarylacetoacetate hydrolase, FAH, N-terminal domain |
| View | Download | 0.343 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.342 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.340 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.339 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.333 | a.64.1 | Saposin |
| View | Download | 0.332 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.330 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.330 | a.1.1 | Globin-like |
| View | Download | 0.329 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.324 | a.11.1 | Acyl-CoA binding protein |
| View | Download | 0.323 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.323 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.321 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.320 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.318 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.318 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.316 | a.39.1 | EF-hand |
| View | Download | 0.314 | a.77.1 | DEATH domain |
| View | Download | 0.314 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.308 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.305 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.304 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.299 | a.29.2 | Bromodomain |
| View | Download | 0.295 | a.11.2 | Second domain of FERM |
| View | Download | 0.294 | b.46.1 | FMT C-terminal domain-like |
| View | Download | 0.294 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.293 | a.118.8 | TPR-like |
| View | Download | 0.293 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.288 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.287 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.286 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.283 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.282 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.279 | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.276 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.275 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.274 | a.39.1 | EF-hand |
| View | Download | 0.273 | a.11.2 | Second domain of FERM |
| View | Download | 0.270 | d.169.1 | C-type lectin-like |
| View | Download | 0.270 | a.17.1 | p8-MTCP1 |
| View | Download | 0.269 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.269 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.265 | a.11.2 | Second domain of FERM |
| View | Download | 0.260 | a.24.3 | Cytochromes |
| View | Download | 0.257 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.256 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.255 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.254 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.251 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.251 | a.118.8 | TPR-like |
| View | Download | 0.250 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.249 | a.24.3 | Cytochromes |
| View | Download | 0.247 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.246 | a.65.1 | Annexin |
| View | Download | 0.246 | a.24.3 | Cytochromes |
| View | Download | 0.245 | a.118.8 | TPR-like |
| View | Download | 0.241 | a.46.1 | Methionine synthase domain |
| View | Download | 0.238 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.237 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.230 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.229 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.224 | a.65.1 | Annexin |
| View | Download | 0.224 | a.4.1 | Homeodomain-like |
| View | Download | 0.223 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.222 | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.222 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.219 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.219 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.218 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.216 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.215 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.214 | a.46.1 | Methionine synthase domain |
| View | Download | 0.214 | a.77.1 | DEATH domain |
| View | Download | 0.211 | b.82.4 | Regulatory protein AraC |
| View | Download | 0.209 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.208 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.208 | a.126.1 | Serum albumin-like |
| View | Download | 0.208 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.207 | a.77.1 | DEATH domain |
| View | Download | 0.203 | f.1.5 | Exotoxin A, middle domain |
|
Region A: Residues: [451-539] |
1 11 21 31 41 51
| | | | | |
1 STAKREKDKY TDLAESDVLT ESLILAFLSR DDADFARVIF DGALGEKLIS GPTAAKKIKN 60
61 LLAQYGEALE TKTSKQVMQT KIEHYMESI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.914 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.773 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.758 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.757 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.743 | a.118.11 | Cytochrome c oxidase subunit E |
